Information for 14-GGAGGCATAT (Motif 38)

A C T G A C T G C G T A A C T G A C T G A G T C C G T A A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C G T A C T G A G T C A G T C A C G T A G T C A G T C
p-value:1e-3
log p-value:-7.950e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets17.0 +/- 0.0bp
Average Position of motif in Background49.8 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROG2/MA0669.1/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GGAGGCATAT---
---GACATATGTT
 A C T G A C T G C G T A A C T G A C T G A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T

Atoh1/MA0461.2/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GGAGGCATAT---
---ANCATATGTT
 A C T G A C T G C G T A A C T G A C T G A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GGAGGCATAT---
--AAGGATATNTN
 A C T G A C T G C G T A A C T G A C T G A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGAGGCATAT--
--ATGMATATDC
 A C T G A C T G C G T A A C T G A C T G A G T C C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGAGGCATAT-
AGGAAACAGCTG
 A C G T A C T G A C T G C G T A A C T G A C T G A G T C C G T A A C G T C G T A A C G T A C G T
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

BHLHE22/MA0818.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGAGGCATAT---
---ANCATATGGT
 A C T G A C T G C G T A A C T G A C T G A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGAGGCATAT
GGTTGGCAT--
 A C G T A C T G A C T G C G T A A C T G A C T G A G T C C G T A A C G T C G T A A C G T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

NEUROD2/MA0668.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GGAGGCATAT---
---GCCATATGGT
 A C T G A C T G C G T A A C T G A C T G A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T

Bhlha15/MA0607.1/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GGAGGCATAT--
----CCATATGT
 A C T G A C T G C G T A A C T G A C T G A G T C C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GGAGGCATAT-
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C T G A G T C C G T A A C G T C G T A A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T