Information for 12-GGGTTAATGG (Motif 34)

A C T G A C T G A C T G A C G T A C G T C G T A C G T A A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C G T A C G T C G T A C G T A A G T C A G T C A G T C
p-value:1e-3
log p-value:-8.355e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets20.0 +/- 0.0bp
Average Position of motif in Background61.7 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:GGGTTAATGG--
--GTTAATGGCC
 A C T G A C T G A C T G A C G T A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:2
Score:0.76
Offset:2
Orientation:forward strand
Alignment:GGGTTAATGG
--GKTAATGR
 A C T G A C T G A C T G A C G T A C G T C G T A C G T A A C G T A C T G A C T G
A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A

BARX1/MA0875.1/Jaspar

Match Rank:3
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GGGTTAATGG-
---NTAATTGN
 A C T G A C T G A C T G A C G T A C G T C G T A C G T A A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GGGTTAATGG-
---CTAATKGV
 A C T G A C T G A C T G A C G T A C G T C G T A C G T A A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

NKX6-2/MA0675.1/Jaspar

Match Rank:5
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GGGTTAATGG-
---TTAATTAN
 A C T G A C T G A C T G A C G T A C G T C G T A C G T A A C G T A C T G A C T G A C G T
A C G T A C G T A C G T C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G

MYBL1/MA0776.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGGTTAATGG-
ACCGTTAACGGT
 A C G T A C T G A C T G A C T G A C G T A C G T C G T A C G T A A C G T A C T G A C T G A C G T
C T G A G T A C T A G C C A T G A G C T G C A T C G T A C T G A A G T C A T C G A C T G G A C T

BSX/MA0876.1/Jaspar

Match Rank:7
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GGGTTAATGG-
---NTAATTGG
 A C T G A C T G A C T G A C G T A C G T C G T A C G T A A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G

GSX2/MA0893.1/Jaspar

Match Rank:8
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGGTTAATGG--
--NTTAATTAGN
 A C T G A C T G A C T G A C G T A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T C A G T A G C T C G A T C G T A C G T A G C A T C A G T C T G A T A C G C A G T

HOXB3/MA0903.1/Jaspar

Match Rank:9
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGGTTAATGG--
--NNTAATTANN
 A C T G A C T G A C T G A C G T A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T

Barhl1/MA0877.1/Jaspar

Match Rank:10
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGGTTAATGG--
--GCTAATTGCT
 A C T G A C T G A C T G A C G T A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T