Information for 13-CCTGGGTTTTTGT (Motif 23)

A G T C A G T C A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A C G T A C G T A C G T A C G T A A G T C A G T C A G T C C G T A A C T G A C T G
p-value:1e-3
log p-value:-9.048e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets72.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCTGGGTTTTTGT------
--TNNTCCTTTGTTCTNNT
 A G T C A G T C A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCTGGGTTTTTGT-----
---GTNTTGTTGTGANNT
 A G T C A G T C A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PB0122.1_Foxk1_2/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CCTGGGTTTTTGT---
-NNNTGTTGTTGTTNG
 A G T C A G T C A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

PB0182.1_Srf_2/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CCTGGGTTTTTGT------
--NNNNTTTTTTTTTNAAC
 A G T C A G T C A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

POL012.1_TATA-Box/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CCTGGGTTTTTGT--
NNNNNNCTTTTATAN
 A G T C A G T C A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CCTGGGTTTTTGT--
NNNNNNCTTTTATAN
 A G T C A G T C A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CCTGGGTTTTTGT
WDNCTGGGCA-----
 A C G T A C G T A G T C A G T C A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C T G A C G T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCTGGGTTTTTGT------
--NNNTCCTTTGTTCTNNN
 A G T C A G T C A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Gfi1b/MA0483.1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CCTGGGTTTTTGT
TGCTGTGATTT---
 A C G T A G T C A G T C A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C T G A C G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CCTGGGTTTTTGT---
------CCTTTGTTTT
 A G T C A G T C A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T