Information for 3-GGGTCTTCAC (Motif 19)

A C T G A C T G A C T G A C G T A G T C A C G T A C G T A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G C G T A C G T A A C T G C G T A A G T C A G T C A G T C
p-value:1e-3
log p-value:-9.048e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.0 +/- 0.0bp
Average Position of motif in Background5.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:1
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---GGGTCTTCAC
NRRGGGTCTT---
 A C G T A C G T A C G T A C T G A C T G A C T G A C G T A G T C A C G T A C G T A G T C C G T A A G T C
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGGTCTTCAC
---GCTTCC-
 A C T G A C T G A C T G A C G T A G T C A C G T A C G T A G T C C G T A A G T C
A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGGTCTTCAC--
GARTGGTCATCGCCC
 A C G T A C G T A C G T A C T G A C T G A C T G A C G T A G T C A C G T A C G T A G T C C G T A A G T C A C G T A C G T
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGGTCTTCAC
GGGGATTTCC
 A C T G A C T G A C T G A C G T A G T C A C G T A C G T A G T C C G T A A G T C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGGTCTTCAC
NGGGGATTTCCC
 A C G T A C G T A C T G A C T G A C T G A C G T A G T C A C G T A C G T A G T C C G T A A G T C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

PB0025.1_Glis2_1/Jaspar

Match Rank:6
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------GGGTCTTCAC
NTNTGGGGGGTCNNNA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A G T C A C G T A C G T A G T C C G T A A G T C
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A A C G T

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGGTCTTCAC
GGGGATTTCC-
 A C G T A C T G A C T G A C T G A C G T A G T C A C G T A C G T A G T C C G T A A G T C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGGTCTTCAC--
GGGGATTCCCCC
 A C T G A C T G A C T G A C G T A G T C A C G T A C G T A G T C C G T A A G T C A C G T A C G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

TBX20/MA0689.1/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GGGTCTTCAC-----
----CTTCACACCTA
 A C T G A C T G A C T G A C G T A G T C A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

SMAD3/MA0795.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGGTCTTCAC-
-TGTCTAGACG
 A C T G A C T G A C T G A C G T A G T C A C G T A C G T A G T C C G T A A G T C A C G T
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G