Information for 2-GAAATTACTA (Motif 18)

A C T G C G T A G T C A G T C A A C G T A C G T C G T A A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C G T G T C A C G T A A C G T A C G T A C G T A G T C
p-value:1e-4
log p-value:-1.006e+01
Information Content per bp:1.935
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif83.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets74.0 +/- 12.0bp
Average Position of motif in Background46.8 +/- 39.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GAAATTACTA
--AATTATT-
 A C T G C G T A G T C A G T C A A C G T A C G T C G T A A G T C A C G T C G T A
A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T

PH0063.1_Hoxb8/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GAAATTACTA--
ACCGGCAATTAATAAA
 A C G T A C G T A C G T A C G T A C T G C G T A G T C A G T C A A C G T A C G T C G T A A G T C A C G T C G T A A C G T A C G T
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A

PH0061.1_Hoxb6/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GAAATTACTA---
NNNGTAATTACNNATA
 A C G T A C G T A C G T A C T G C G T A G T C A G T C A A C G T A C G T C G T A A G T C A C G T C G T A A C G T A C G T A C G T
T C G A G T C A A T C G C A T G A G C T G T C A C G T A C G A T C A G T C T G A T G A C T A G C G T C A G C T A C G A T C G T A

PH0062.1_Hoxb7/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GAAATTACTA-
TNNCATTAATTANTNC
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A G T C A G T C A A C G T A C G T C G T A A G T C A C G T C G T A A C G T
A G C T C G A T T A C G G T A C T G C A A C G T G A C T G T C A G C T A C G A T C A G T C T G A T G A C A C G T T C G A T A G C

PH0055.1_Hoxa7_2/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GAAATTACTA-
TNCCATTAATTACTNC
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A G T C A G T C A A C G T A C G T C G T A A G T C A C G T C G T A A C G T
A C G T C A G T A T G C A G T C T G C A A C G T G C A T G T C A C G T A A C G T C A G T C G T A T G A C A C G T T G C A T G A C

PH0071.1_Hoxc6/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GAAATTACTA---
CAAATTAATTAATAAAA
 A C G T A C G T A C G T A C G T A C T G C G T A G T C A G T C A A C G T A C G T C G T A A G T C A C G T C G T A A C G T A C G T A C G T
A G T C C T G A G C T A T C G A C A G T G A C T G C T A C G T A C G A T C G A T C T G A G T C A A C G T C G T A T C G A T G C A C G T A

Dlx4/MA0881.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GAAATTACTA
CCAATTAC--
 A C T G C G T A G T C A G T C A A C G T A C G T C G T A A G T C A C G T C G T A
T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C A C G T A C G T

Dlx3/MA0880.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAAATTACTA
CCAATTAC--
 A C T G C G T A G T C A G T C A A C G T A C G T C G T A A G T C A C G T C G T A
T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C A C G T A C G T

Dlx2/MA0885.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAAATTACTA
GCAATTAA--
 A C T G C G T A G T C A G T C A A C G T A C G T C G T A A G T C A C G T C G T A
T A C G G A T C G T C A G T C A A C G T A C G T C G T A G C T A A C G T A C G T

DLX6/MA0882.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAAATTACTA
CCAATTAC--
 A C T G C G T A G T C A G T C A A C G T A C G T C G T A A G T C A C G T C G T A
T A G C G A T C G T C A G T C A C G A T A G C T G C T A G T A C A C G T A C G T