Information for 3-TGGTGTCACC (Motif 8)

A C G T A C T G A C T G A G C T C T A G G A C T A G T C C T G A A T G C A G T C
Reverse Opposite:
A C T G A T C G A G C T A C T G C T G A A G T C C T G A A G T C A G T C C G T A
p-value:1e-7
log p-value:-1.820e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif4.26%
Number of Background Sequences with motif48.8
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets23.3 +/- 17.6bp
Average Position of motif in Background44.1 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TGGTGTCACC---
TNNNNGGTGTCATNTNT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G C T C T A G G A C T A G T C C T G A A T G C A G T C A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGGTGTCACC
AGGTGTCA--
 A C G T A C T G A C T G A G C T C T A G G A C T A G T C C T G A A T G C A G T C
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGGTGTCACC-
ATGACGTCAYYN
 A C G T A C G T A C T G A C T G A G C T C T A G G A C T A G T C C T G A A T G C A G T C A C G T
T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGGTGTCACC-
GTGGCGTGACNG
 A C G T A C G T A C T G A C T G A G C T C T A G G A C T A G T C C T G A A T G C A G T C A C G T
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGGTGTCACC-
-VBTGWCAGCB
 A C G T A C T G A C T G A G C T C T A G G A C T A G T C C T G A A T G C A G T C A C G T
A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGGTGTCACC-
ATGACGTCATCN
 A C G T A C G T A C T G A C T G A G C T C T A G G A C T A G T C C T G A A T G C A G T C A C G T
T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGGTGTCACC-
RTGACGTCAYCN
 A C G T A C G T A C T G A C T G A G C T C T A G G A C T A G T C C T G A A T G C A G T C A C G T
T C G A G A C T A C T G C G T A A G T C T C A G G A C T T G A C C T G A A G C T G A T C A T C G

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGGTGTCACC
TGACGTCATC
 A C G T A C T G A C T G A G C T C T A G G A C T A G T C C T G A A T G C A G T C
G A C T A C T G C T G A A G T C T C A G G A C T T G A C C T G A A G C T A T G C

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGGTGTCACC
ATGGGGTGAT-
 A C G T A C G T A C T G A C T G A G C T C T A G G A C T A G T C C T G A A T G C A G T C
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGGTGTCACC-
ATGACGTCATCN
 A C G T A C G T A C T G A C T G A G C T C T A G G A C T A G T C C T G A A T G C A G T C A C G T
T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T G A T C T C G A