Information for 3-GCCSTKTCGGGCTCGA (Motif 7)

A T C G A T G C T A G C A T C G A C G T A C G T A C G T A G T C A T C G C A T G A C T G A G T C A G C T A T G C A T C G T C G A
Reverse Opposite:
A G C T A T G C T A C G C T G A A C T G A G T C G A T C A T G C T A C G T G C A T G C A C G T A A T G C A C T G A T C G A T G C
p-value:1e-7
log p-value:-1.825e+01
Information Content per bp:1.603
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif7.09%
Number of Background Sequences with motif259.2
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets42.6 +/- 27.1bp
Average Position of motif in Background49.4 +/- 34.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GCCSTKTCGGGCTCGA
-----TNNGGGCAG--
 A T C G A T G C T A G C A T C G A C G T A C G T A C G T A G T C A T C G C A T G A C T G A G T C A G C T A T G C A T C G T C G A
A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:2
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCCSTKTCGGGCTCGA
TGCCCTGAGGGCA---
 A T C G A T G C T A G C A T C G A C G T A C G T A C G T A G T C A T C G C A T G A C T G A G T C A G C T A T G C A T C G T C G A
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GCCSTKTCGGGCTCGA
----GCTCGGSCTC--
 A T C G A T G C T A G C A T C G A C G T A C G T A C G T A G T C A T C G C A T G A C T G A G T C A G C T A T G C A T C G T C G A
A C G T A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCCSTKTCGGGCTCGA
TGCCCTGAGGGCA---
 A T C G A T G C T A G C A T C G A C G T A C G T A C G T A G T C A T C G C A T G A C T G A G T C A G C T A T G C A T C G T C G A
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:5
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GCCSTKTCGGGCTCGA
TGCCCTGAGGGCA---
 A T C G A T G C T A G C A T C G A C G T A C G T A C G T A G T C A T C G C A T G A C T G A G T C A G C T A T G C A T C G T C G A
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:6
Score:0.51
Offset:8
Orientation:forward strand
Alignment:GCCSTKTCGGGCTCGA--
--------GGGCGGGACC
 A T C G A T G C T A G C A T C G A C G T A C G T A C G T A G T C A T C G C A T G A C T G A G T C A G C T A T G C A T C G T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GCCSTKTCGGGCTCGA
NAGANTGGCGGGGNGNA
 A C G T A T C G A T G C T A G C A T C G A C G T A C G T A C G T A G T C A T C G C A T G A C T G A G T C A G C T A T G C A T C G T C G A
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:GCCSTKTCGGGCTCGA--
--NNNNTTGGGCACNNCN
 A T C G A T G C T A G C A T C G A C G T A C G T A C G T A G T C A T C G C A T G A C T G A G T C A G C T A T G C A T C G T C G A A C G T A C G T
A C G T A C G T A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.49
Offset:8
Orientation:forward strand
Alignment:GCCSTKTCGGGCTCGA---
--------GGGCGGGAAGG
 A T C G A T G C T A G C A T C G A C G T A C G T A C G T A G T C A T C G C A T G A C T G A G T C A G C T A T G C A T C G T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

PLAG1/MA0163.1/Jaspar

Match Rank:10
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---GCCSTKTCGGGCTCGA
GGGGCCCAAGGGGG-----
 A C G T A C G T A C G T A T C G A T G C T A G C A T C G A C G T A C G T A C G T A G T C A T C G C A T G A C T G A G T C A G C T A T G C A T C G T C G A
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G A C G T A C G T A C G T A C G T A C G T