Information for 13-GAACTGAGTGGTT (Motif 14)

A C T G C G T A C G T A A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A G T C C G T A A G T C A C G T A G T C C G T A A C T G A C G T A C G T A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GAACTGAGTGGTT
---TTRAGTGSYK
 A C T G C G T A C G T A A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GAACTGAGTGGTT
--CTTGAGTGGCT
 A C T G C G T A C G T A A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GAACTGAGTGGTT
---TTAAGTGCTT
 A C T G C G T A C G T A A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

NFYB/MA0502.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GAACTGAGTGGTT-----
---CTGATTGGTCNATTT
 A C T G C G T A C G T A A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GAACTGAGTGGTT
---TTGAGTGSTT
 A C T G C G T A C G T A A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

NFYA/MA0060.2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GAACTGAGTGGTT--
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C T G C G T A C G T A A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GAACTGAGTGGTT---
----TGATTGGCTANN
 A C T G C G T A C G T A A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GAACTGAGTGGTT
---TTAAGTGGT-
 A C T G C G T A C G T A A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GAACTGAGTGGTT-
----NNTGTGGTTT
 A C T G C G T A C G T A A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

NKX3-2/MA0122.2/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GAACTGAGTGGTT
---TTAAGTGGN-
 A C T G C G T A C G T A A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T