Information for 1-TTGTTGGTGT (Motif 1)

A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A G T C A G T C C G T A C G T A A G T C C G T A C G T A
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets17.0 +/- 0.0bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTGTTGGTGT---
NNNTGTTGTTGTTNG
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C G T A C T G A C G T A C G T A C G T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TTGTTGGTGT
ATTGTT-----
 A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C G T A C T G A C G T
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTGTTGGTGT
GAATGTTTGTTT
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C G T A C T G A C G T
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

PB0120.1_Foxj1_2/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTGTTGGTGT-----
GTNTTGTTGTGANNT
 A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTGTTGGTGT
CCATTGTTNY---
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C G T A C T G A C G T
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTGTTGGTGT
ATTGTTA----
 A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C G T A C T G A C G T
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTGTTGGTGT--
NTNTTGTTGTTTGTN
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C G T A C T G A C G T A C G T A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

PB0172.1_Sox1_2/Jaspar

Match Rank:8
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------TTGTTGGTGT
CTATAATTGTTAGCG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C G T A C T G A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTGTTGGTGT-
NCNTTTGTTATTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C G T A C T G A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PH0164.1_Six4/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTGTTGGTGT-------
TNNNNGGTGTCATNTNT
 A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T