Information for 2-SWYAATCACAMKA (Motif 5)

A T C G C G T A A G T C C G T A C G T A A C G T A G T C C G T A A G T C C G T A G T A C A C T G C G T A
Reverse Opposite:
A C G T G T A C A C T G A C G T A C T G A C G T A C T G C G T A A C G T A C G T C T A G C G A T T A C G
p-value:1e-9
log p-value:-2.084e+01
Information Content per bp:1.849
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif3.49%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.2 +/- 25.9bp
Average Position of motif in Background58.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:SWYAATCACAMKA
-CAAATCACTG--
 A T C G C G T A A G T C C G T A C G T A A C G T A G T C C G T A A G T C C G T A G T A C A C T G C G T A
A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:SWYAATCACAMKA
-CCAATCAA----
 A T C G C G T A A G T C C G T A C G T A A C G T A G T C C G T A A G T C C G T A G T A C A C T G C G T A
A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:forward strand
Alignment:SWYAATCACAMKA-
----ATCACCCCAC
 A T C G C G T A A G T C C G T A C G T A A C G T A G T C C G T A A G T C C G T A G T A C A C T G C G T A A C G T
A C G T A C G T A C G T A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.63
Offset:4
Orientation:forward strand
Alignment:SWYAATCACAMKA-
----ATCACCCCAT
 A T C G C G T A A G T C C G T A C G T A A C G T A G T C C G T A A G T C C G T A G T A C A C T G C G T A A C G T
A C G T A C G T A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

SREBF2/MA0596.1/Jaspar

Match Rank:5
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:SWYAATCACAMKA-
----ATCACCCCAT
 A T C G C G T A A G T C C G T A C G T A A C G T A G T C C G T A A G T C C G T A G T A C A C T G C G T A A C G T
A C G T A C G T A C G T A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

Gfi1b/MA0483.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:SWYAATCACAMKA
--AAATCACAGCA
 A T C G C G T A A G T C C G T A C G T A A C G T A G T C C G T A A G T C C G T A G T A C A C T G C G T A
A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:SWYAATCACAMKA
-NWAACCACADNN
 A T C G C G T A A G T C C G T A C G T A A C G T A G T C C G T A A G T C C G T A G T A C A C T G C G T A
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:SWYAATCACAMKA-
----GTCACATGAY
 A T C G C G T A A G T C C G T A C G T A A C G T A G T C C G T A A G T C C G T A G T A C A C T G C G T A A C G T
A C G T A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:SWYAATCACAMKA
--AAACCACANN-
 A T C G C G T A A G T C C G T A C G T A A C G T A G T C C G T A A G T C C G T A G T A C A C T G C G T A
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:SWYAATCACAMKA
-NAAACCACAG--
 A T C G C G T A A G T C C G T A C G T A A C G T A G T C C G T A A G T C C G T A G T A C A C T G C G T A
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T