Information for 5-CAGTAAGTGCATA (Motif 12)

A G T C C G T A C T A G A C G T C G T A C G T A C T A G A G C T C T A G A G T C C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C T G A G T C C T G A A G T C A C G T A C G T C G T A A G T C A C G T A C T G
p-value:1e-5
log p-value:-1.199e+01
Information Content per bp:1.945
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 22.7bp
Average Position of motif in Background86.5 +/- 11.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ISL2/MA0914.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CAGTAAGTGCATA
--TTAAGTGC---
 A G T C C G T A C T A G A C G T C G T A C G T A C T A G A G C T C T A G A G T C C G T A A C G T C G T A
A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CAGTAAGTGCATA
ACAGGAAGTG----
 A C G T A G T C C G T A C T A G A C G T C G T A C G T A C T A G A G C T C T A G A G T C C G T A A C G T C G T A
T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CAGTAAGTGCATA
--TTAAGTGCTT-
 A G T C C G T A C T A G A C G T C G T A C G T A C T A G A G C T C T A G A G T C C G T A A C G T C G T A
A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAGTAAGTGCATA
ACAGGAAGTG----
 A C G T A G T C C G T A C T A G A C G T C G T A C G T A C T A G A G C T C T A G A G T C C G T A A C G T C G T A
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CAGTAAGTGCATA---
CNTTAAGTACTTAANG
 A G T C C G T A C T A G A C G T C G T A C G T A C T A G A G C T C T A G A G T C C G T A A C G T C G T A A C G T A C G T A C G T
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

PB0026.1_Gm397_1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAGTAAGTGCATA----
NNGTATGTGCACATNNN
 A G T C C G T A C T A G A C G T C G T A C G T A C T A G A G C T C T A G A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PH0004.1_Nkx3-2/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CAGTAAGTGCATA--
NTNNTTAAGTGGTTANN
 A C G T A C G T A G T C C G T A C T A G A C G T C G T A C G T A C T A G A G C T C T A G A G T C C G T A A C G T C G T A A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

NKX3-2/MA0122.2/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CAGTAAGTGCATA
--TTAAGTGGN--
 A G T C C G T A C T A G A C G T C G T A C G T A C T A G A G C T C T A G A G T C C G T A A C G T C G T A
A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAGTAAGTGCATA----
NTNTATGTGCACATNNN
 A G T C C G T A C T A G A C G T C G T A C G T A C T A G A G C T C T A G A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGTAAGTGCATA
AACAGGAAGT-----
 A C G T A C G T A G T C C G T A C T A G A C G T C G T A C G T A C T A G A G C T C T A G A G T C C G T A A C G T C G T A
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T A C G T A C G T