Information for 1-AGTGGACATC (Motif 1)

C G T A C T A G A C G T A C T G A C T G C G T A A G T C C G T A A C G T A G T C
Reverse Opposite:
A C T G G T C A A C G T C T A G A C G T A G T C A G T C C G T A A G T C A C G T
p-value:1e-10
log p-value:-2.441e+01
Information Content per bp:1.918
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif6.98%
Number of Background Sequences with motif30.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets52.5 +/- 19.0bp
Average Position of motif in Background51.8 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AGTGGACATC
-GTGGAT---
 C G T A C T A G A C G T A C T G A C T G C G T A A G T C C G T A A C G T A G T C
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGTGGACATC----
GARTGGTCATCGCCC
 A C G T C G T A C T A G A C G T A C T G A C T G C G T A A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AGTGGACATC--
NNGTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T A C T G A C T G C G T A A G T C C G T A A C G T A G T C A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGTGGACATC
AATGGAAAAT
 C G T A C T A G A C G T A C T G A C T G C G T A A G T C C G T A A C G T A G T C
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGTGGACATC----
NNATTGGACTTTNGNN
 A C G T A C G T C G T A C T A G A C G T A C T G A C T G C G T A A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PH0004.1_Nkx3-2/Jaspar

Match Rank:6
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------AGTGGACATC
NTNNTTAAGTGGTTANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T A C T G A C T G C G T A A G T C C G T A A C G T A G T C
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AGTGGACATC
NTCAAGTGGN----
 A C G T A C G T A C G T A C G T C G T A C T A G A C G T A C T G A C T G C G T A A G T C C G T A A C G T A G T C
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGTGGACATC
NATGGAAAAN
 C G T A C T A G A C G T A C T G A C T G C G T A A G T C C G T A A C G T A G T C
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGTGGACATC
TTRAGTGSYK---
 A C G T A C G T A C G T C G T A C T A G A C G T A C T G A C T G C G T A A G T C C G T A A C G T A G T C
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----AGTGGACATC--
NTNTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T A C T G A C T G C G T A A G T C C G T A A C G T A G T C A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A