Information for 4-CGTGATGATAATT (Motif 8)

A G T C A C T G C G A T A C T G C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T A C G T
Reverse Opposite:
G T C A C G T A A C G T A C G T C G T A C G A T A G T C C G T A A C G T A G T C C G T A A G T C A C T G
p-value:1e-5
log p-value:-1.373e+01
Information Content per bp:1.944
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif2.78%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.5 +/- 26.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0017.1_Cux1_2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CGTGATGATAATT-
TAATGATGATCACTA
 A C G T A G T C A C T G C G A T A C T G C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T A C G T A C G T
C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A

POU3F1/MA0786.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CGTGATGATAATT-
--TTATGCAAATTA
 A G T C A C T G C G A T A C T G C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

POU3F2/MA0787.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CGTGATGATAATT-
--TTATGCAAATTA
 A G T C A C T G C G A T A C T G C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CGTGATGATAATT--
---TATGCWAATBAV
 A G T C A C T G C G A T A C T G C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

PB0079.1_Sry_1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGTGATGATAATT---
NANTATTATAATTNNN
 A G T C A C T G C G A T A C T G C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

POU3F3/MA0788.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CGTGATGATAATT-
-ATTATGCTAATTT
 A G T C A C T G C G A T A C T G C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T A C G T A C G T
A C G T C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T

PB0064.1_Sox14_1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CGTGATGATAATT---
NNTAATTATAATTNNN
 A G T C A C T G C G A T A C T G C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

PB0069.1_Sox21_1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGTGATGATAATT---
TTTAATTATAATTAAG
 A G T C A C T G C G A T A C T G C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

Dlx1/MA0879.1/Jaspar

Match Rank:9
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:CGTGATGATAATT---
------NNTAATTANN
 A G T C A C T G C G A T A C T G C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T G C A C G A T T G C A G C T A C G A T A C G T C T G A A C T G A C T G

HESX1/MA0894.1/Jaspar

Match Rank:10
Score:0.61
Offset:6
Orientation:forward strand
Alignment:CGTGATGATAATT---
------GCTAATTGGC
 A G T C A C T G C G A T A C T G C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A T C C G A T C T G A T C G A A C G T A G C T C T A G T C A G G A T C