Information for 4-TTTCCGAGAT (Motif 7)

A C G T A C G T A C G T A G T C A G T C A C T G C G T A A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A C G T A G T C A C T G A C T G C G T A C G T A C G T A
p-value:1e-5
log p-value:-1.373e+01
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif2.78%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.7 +/- 15.4bp
Average Position of motif in Background18.0 +/- 8.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0048.1_Hoxa13/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TTTCCGAGAT--
ANATTTTACGAGNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A C T G C G T A A C G T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TTTCCGAGAT
ATTTCCAAGAA
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A C T G C G T A A C G T
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A

HOXC13/MA0907.1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TTTCCGAGAT
NTTTTACGAGN-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A C T G C G T A A C G T
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:4
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TTTCCGAGAT--
NAATTTTACGAGNTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A C T G C G T A A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTTCCGAGAT----
GNNACCGAGAATNNN
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

NFATC1/MA0624.1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTTCCGAGAT
ATTTTCCATT--
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A C T G C G T A A C G T
C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T A C G T A C G T

PB0075.1_Sp100_1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTTCCGAGAT--
ATTTTCCGNNAAAT
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A C T G C G T A A C G T A C G T A C G T
G T C A C G A T C G A T G C A T C A G T G T A C A T G C A T C G C A G T C T G A C G T A G C T A G C T A A G C T

STAT3/MA0144.2/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTTCCGAGAT-
TTTCCCAGAAN
 A C G T A C G T A C G T A G T C A G T C A C T G C G T A A C T G C G T A A C G T A C G T
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TTTCCGAGAT-
NTTTCTNAGAAA
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A C T G C G T A A C G T A C G T
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A

STAT1/MA0137.3/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTTCCGAGAT-
TTTCCTGGAAA
 A C G T A C G T A C G T A G T C A G T C A C T G C G T A A C T G C G T A A C G T A C G T
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A