Information for 2-TGTGAAMATACATTGT (Motif 3)

C G A T A C T G C G A T C A T G C G T A C G T A G T A C G T C A C A G T C T G A G T A C C G T A C G A T C A G T C T A G C G A T
Reverse Opposite:
C G T A A G T C G T C A C G T A C G A T A C T G A G C T G C T A C A G T C A T G C G A T C G A T G A T C G C T A A G T C C G T A
p-value:1e-7
log p-value:-1.786e+01
Information Content per bp:1.641
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif298.3
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets50.5 +/- 28.9bp
Average Position of motif in Background49.7 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0013.1_Eomes_1/Jaspar

Match Rank:1
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------TGTGAAMATACATTGT
GAAAAGGTGTGAAAATT------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G A T C A T G C G T A C G T A G T A C G T C A C A G T C T G A G T A C C G T A C G A T C A G T C T A G C G A T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TGTGAAMATACATTGT
CAGATGTGCACATACGT---
 A C G T A C G T A C G T A C G T C G A T A C T G C G A T C A T G C G T A C G T A G T A C G T C A C A G T C T G A G T A C C G T A C G A T C A G T C T A G C G A T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TGTGAAMATACATTGT
AAGGTGTGAAAAT-------
 A C G T A C G T A C G T A C G T C G A T A C T G C G A T C A T G C G T A C G T A G T A C G T C A C A G T C T G A G T A C C G T A C G A T C A G T C T A G C G A T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TGTGAAMATACATTGT
AGGTGTGAAA---------
 A C G T A C G T A C G T C G A T A C T G C G A T C A T G C G T A C G T A G T A C G T C A C A G T C T G A G T A C C G T A C G A T C A G T C T A G C G A T
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TGTGAAMATACATTGT
AAGGTGTKAA----------
 A C G T A C G T A C G T A C G T C G A T A C T G C G A T C A T G C G T A C G T A G T A C G T C A C A G T C T G A G T A C C G T A C G A T C A G T C T A G C G A T
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGTGAAMATACATTGT
TATGTAAATAT-------
 A C G T A C G T C G A T A C T G C G A T C A T G C G T A C G T A G T A C G T C A C A G T C T G A G T A C C G T A C G A T C A G T C T A G C G A T
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGTGAAMATACATTGT
ATGTAAACADGS-----
 A C G T C G A T A C T G C G A T C A T G C G T A C G T A G T A C G T C A C A G T C T G A G T A C C G T A C G A T C A G T C T A G C G A T
C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C A C G T A C G T A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGTGAAMATACATTGT
TATGTAAACANG------
 A C G T A C G T C G A T A C T G C G A T C A T G C G T A C G T A G T A C G T C A C A G T C T G A G T A C C G T A C G A T C A G T C T A G C G A T
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TGTGAAMATACATTGT
TACATGTGCACATAAAA---
 A C G T A C G T A C G T A C G T C G A T A C T G C G A T C A T G C G T A C G T A G T A C G T C A C A G T C T G A G T A C C G T A C G A T C A G T C T A G C G A T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TGTGAAMATACATTGT
AAGGTGTGAA----------
 A C G T A C G T A C G T A C G T C G A T A C T G C G A T C A T G C G T A C G T A G T A C G T C A C A G T C T G A G T A C C G T A C G A T C A G T C T A G C G A T
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T