Information for 1-ATCTTGCTTT (Motif 2)

T C G A A C G T G T A C A C G T A C G T T A C G A G T C G C A T A G C T A G C T
Reverse Opposite:
T C G A C T G A C G T A C T A G A T G C C G T A C G T A C A T G G T C A A G C T
p-value:1e-9
log p-value:-2.195e+01
Information Content per bp:1.729
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif20.83%
Number of Background Sequences with motif1214.5
Percentage of Background Sequences with motif2.51%
Average Position of motif in Targets42.7 +/- 28.3bp
Average Position of motif in Background50.5 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ATCTTGCTTT
GAATGTTTGTTT
 A C G T A C G T T C G A A C G T G T A C A C G T A C G T T A C G A G T C G C A T A G C T A G C T
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

SPIB/MA0081.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ATCTTGCTTT
---TTCCTCT
 T C G A A C G T G T A C A C G T A C G T T A C G A G T C G C A T A G C T A G C T
A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T

Mecom/MA0029.1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----ATCTTGCTTT
TNTTATCTTATCTT
 A C G T A C G T A C G T A C G T T C G A A C G T G T A C A C G T A C G T T A C G A G T C G C A T A G C T A G C T
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T

ONECUT3/MA0757.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATCTTGCTTT---
NTTATTGATTTTTT
 A C G T T C G A A C G T G T A C A C G T A C G T T A C G A G T C G C A T A G C T A G C T A C G T A C G T A C G T
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

NFATC3/MA0625.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATCTTGCTTT
ATTTTCCATT
 T C G A A C G T G T A C A C G T A C G T T A C G A G T C G C A T A G C T A G C T
C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ATCTTGCTTT-----
-TTTTTTTTCNNGTN
 T C G A A C G T G T A C A C G T A C G T T A C G A G T C G C A T A G C T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PB0093.1_Zfp105_1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ATCTTGCTTT--
NTNTTGTTGTTTGTN
 A C G T A C G T A C G T T C G A A C G T G T A C A C G T A C G T T A C G A G T C G C A T A G C T A G C T A C G T A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

PB0123.1_Foxl1_2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ATCTTGCTTT-----
NNTTTTGTTTTGATNT
 A C G T T C G A A C G T G T A C A C G T A C G T T A C G A G T C G C A T A G C T A G C T A C G T A C G T A C G T A C G T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

PB0083.1_Tcf7_1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ATCTTGCTTT--------
-NNTTCCTTTGATCTNNA
 T C G A A C G T G T A C A C G T A C G T T A C G A G T C G C A T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

Arid5a/MA0602.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATCTTGCTTT-
CTAATATTGCTAAA
 A C G T A C G T A C G T T C G A A C G T G T A C A C G T A C G T T A C G A G T C G C A T A G C T A G C T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A