p-value: | 1e-9 |
log p-value: | -2.288e+01 |
Information Content per bp: | 1.702 |
Number of Target Sequences with motif | 25.0 |
Percentage of Target Sequences with motif | 2.92% |
Number of Background Sequences with motif | 281.4 |
Percentage of Background Sequences with motif | 0.58% |
Average Position of motif in Targets | 43.2 +/- 25.9bp |
Average Position of motif in Background | 49.2 +/- 29.2bp |
Strand Bias (log2 ratio + to - strand density) | 0.1 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0068.1_Hoxc13/Jaspar
Match Rank: | 1 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AAMTCACAAAACT- AAAGCTCGTAAAATTT |
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HOXC10/MA0905.1/Jaspar
Match Rank: | 2 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AAMTCACAAAACT --GTCGTAAAAT- |
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PH0064.1_Hoxb9/Jaspar
Match Rank: | 3 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AAMTCACAAAACT-- AGAGCCATAAAATTCG |
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HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AAMTCACAAAACT -NCYAATAAAA-- |
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PH0047.1_Hoxa11/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AAMTCACAAAACT- TAAAGTCGTAAAACAT |
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Hoxa11/MA0911.1/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AAMTCACAAAACT -GGTCGTAAAATT |
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HOXD12/MA0873.1/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AAMTCACAAAACT -AGTCGTAAAAA- |
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Gfi1/MA0038.1/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AAMTCACAAAACT CAAATCACTG---- |
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ONECUT3/MA0757.1/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AAMTCACAAAACT AAAAAATCAATAAT-- |
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HOXC13/MA0907.1/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AAMTCACAAAACT -GCTCGTAAAAA- |
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