Information for 3-GAAGATCGCG (Motif 14)

A T C G C T G A C T G A C T A G T G C A G A C T A T G C A C T G G T A C T A C G
Reverse Opposite:
A T G C C A T G T G A C T A C G C T G A A C G T A G T C A G C T G A C T T A G C
p-value:1e-10
log p-value:-2.363e+01
Information Content per bp:1.681
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.92%
Number of Background Sequences with motif271.6
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets55.8 +/- 21.3bp
Average Position of motif in Background51.3 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GAAGATCGCG--
CAAGATGGCGGC
 A T C G C T G A C T G A C T A G T G C A G A C T A T G C A C T G G T A C T A C G A C G T A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GAAGATCGCG
NGAAGC-----
 A C G T A T C G C T G A C T G A C T A G T G C A G A C T A T G C A C T G G T A C T A C G
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GAAGATCGCG--
CAAGATGGCGGC
 A T C G C T G A C T G A C T A G T G C A G A C T A T G C A C T G G T A C T A C G A C G T A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY2/MA0748.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GAAGATCGCG---
--TAATGGCGGNC
 A T C G C T G A C T G A C T A G T G C A G A C T A T G C A C T G G T A C T A C G A C G T A C G T A C G T
A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

POL005.1_DPE/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAAGATCGCG
GAAGATGTT-
 A T C G C T G A C T G A C T A G T G C A G A C T A T G C A C T G G T A C T A C G
T C A G G T C A C T G A A T C G G C T A G A C T T A C G G A C T G A C T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:6
Score:0.52
Offset:-8
Orientation:reverse strand
Alignment:--------GAAGATCGCG
NNNNGGGGGAAGANGG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T G A C T G A C T A G T G C A G A C T A T G C A C T G G T A C T A C G
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GAAGATCGCG
AACAGATGGC-
 A C G T A T C G C T G A C T G A C T A G T G C A G A C T A T G C A C T G G T A C T A C G
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

E2F2/MA0864.1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GAAGATCGCG-------
-AAAATGGCGCCATTTT
 A T C G C T G A C T G A C T A G T G C A G A C T A T G C A C T G G T A C T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

MF0001.1_ETS_class/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----GAAGATCGCG
ACCGGAAG------
 A C G T A C G T A C G T A C G T A T C G C T G A C T G A C T A G T G C A G A C T A T G C A C T G G T A C T A C G
C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

E2F3/MA0469.2/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GAAGATCGCG--------
AAAAATGGCGCCATTTTT
 A T C G C T G A C T G A C T A G T G C A G A C T A T G C A C T G G T A C T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T