Information for 5-KGWYCWWWCWYTTTYA (Motif 6)

A C G T A C T G C G T A A G T C A G T C C G A T C G A T C G T A A G T C C G A T G A C T A C G T A C G T A C G T A G C T C G T A
Reverse Opposite:
A C G T C T G A C G T A C G T A G T C A C T A G C G T A A C T G C G A T C G T A C G T A A C T G C T A G C G A T A G T C G T C A
p-value:1e-9
log p-value:-2.251e+01
Information Content per bp:1.784
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.7 +/- 12.0bp
Average Position of motif in Background33.5 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:KGWYCWWWCWYTTTYA
---ACTTTCACTTTC-
 A C G T A C T G C G T A A G T C A G T C C G A T C G A T C G T A A G T C C G A T G A C T A C G T A C G T A C G T A G C T C G T A
A C G T A C G T A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T

IRF1/MA0050.2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-KGWYCWWWCWYTTTYA----
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C T G C G T A A G T C A G T C C G A T C G A T C G T A A G T C C G A T G A C T A C G T A C G T A C G T A G C T C G T A A C G T A C G T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

PRDM1/MA0508.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:KGWYCWWWCWYTTTYA
-TCACTTTCACTTTCN
 A C G T A C T G C G T A A G T C A G T C C G A T C G A T C G T A A G T C C G A T G A C T A C G T A C G T A C G T A G C T C G T A
A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--KGWYCWWWCWYTTTYA--
NNTGTTCTTTTTTGTTTACT
 A C G T A C G T A C G T A C T G C G T A A G T C A G T C C G A T C G A T C G T A A G T C C G A T G A C T A C G T A C G T A C G T A G C T C G T A A C G T A C G T
G C A T G C T A C G A T A T C G G C A T C G A T G A T C G A C T G C A T A G C T A G C T A G C T G C A T T C A G A C G T A C G T A C G T C T G A G A T C G C A T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:KGWYCWWWCWYTTTYA---
----CTTTCANTATGACTV
 A C G T A C T G C G T A A G T C A G T C C G A T C G A T C G T A A G T C C G A T G A C T A C G T A C G T A C G T A G C T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:KGWYCWWWCWYTTTYA
---ACTTTCACTTTC-
 A C G T A C T G C G T A A G T C A G T C C G A T C G A T C G T A A G T C C G A T G A C T A C G T A C G T A C G T A G C T C G T A
A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T

SPIC/MA0687.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:KGWYCWWWCWYTTTYA
--TACTTCCTCTTTTN
 A C G T A C T G C G T A A G T C A G T C C G A T C G A T C G T A A G T C C G A T G A C T A C G T A C G T A C G T A G C T C G T A
A C G T A C G T C A G T C G T A A G T C A C G T C G A T G T A C T A G C A C G T A T G C C G A T C A G T C A G T G A C T C A G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:KGWYCWWWCWYTTTYA
---RSTTTCRSTTTC-
 A C G T A C T G C G T A A G T C A G T C C G A T C G A T C G T A A G T C C G A T G A C T A C G T A C G T A C G T A G C T C G T A
A C G T A C G T A C G T T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:KGWYCWWWCWYTTTYA
---ASTTTCASTTYC-
 A C G T A C T G C G T A A G T C A G T C C G A T C G A T C G T A A G T C C G A T G A C T A C G T A C G T A C G T A G C T C G T A
A C G T A C G T A C G T C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:KGWYCWWWCWYTTTYA
---AGTTTCAGTTTC-
 A C G T A C T G C G T A A G T C A G T C C G A T C G A T C G T A A G T C C G A T G A C T A C G T A C G T A C G T A G C T C G T A
A C G T A C G T A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T