Information for 14-CAGATCCATT (Motif 44)

A G T C C G T A A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C T G A C T G C G T A A C G T A G T C A C G T A C T G
p-value:1e-2
log p-value:-6.862e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.17%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.0 +/- 0.0bp
Average Position of motif in Background47.9 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CAGATCCATT-
-DGATCRATAN
 A G T C C G T A A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C G T A C G T
A C G T C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CAGATCCATT
HNRAATCAAT-
 A C G T A G T C C G T A A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C G T
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CAGATCCATT------
NNCATTCATTCATNNN
 A G T C C G T A A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAGATCCATT----
AAAAACCATTAAGG
 A G T C C G T A A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGATCCATT
AAGATATCCTT-
 A C G T A C G T A G T C C G T A A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C G T
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CAGATCCATT
ATAATCCC--
 A G T C C G T A A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C G T
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAGATCCATT
NTTGATACATT
 A C G T A G T C C G T A A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C G T
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAGATCCATT-
-TAATCAATTA
 A G T C C G T A A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C G T A C G T
A C G T C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGATCCATT
GHATATKCAT-
 A C G T A G T C C G T A A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C G T
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CAGATCCATT
TKCTGTTCCA--
 A C G T A C G T A G T C C G T A A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C G T
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T