Information for 6-CTGGGGTAAC (Motif 31)

A G T C A C G T A C T G A C T G A C T G A C T G A G C T C G T A C G T A A G T C
Reverse Opposite:
C T A G A C G T A C G T C T G A A G T C A G T C A G T C A G T C C G T A A C T G
p-value:1e-4
log p-value:-9.496e+00
Information Content per bp:1.926
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif25.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets45.8 +/- 21.9bp
Average Position of motif in Background56.9 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF2/MA0596.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CTGGGGTAAC
ATGGGGTGAT
 A G T C A C G T A C T G A C T G A C T G A C T G A G C T C G T A C G T A A G T C
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

SREBF1/MA0595.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTGGGGTAAC
GTGGGGTGAT
 A G T C A C G T A C T G A C T G A C T G A C T G A G C T C G T A C G T A A G T C
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

PB0204.1_Zfp740_2/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CTGGGGTAAC--
ANTNCCGGGGGGAANTT
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C T G A C T G A G C T C G T A C G T A A G T C A C G T A C G T
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTGGGGTAAC
ATGGGGTGAT
 A G T C A C G T A C T G A C T G A C T G A C T G A G C T C G T A C G T A A G T C
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTGGGGTAAC--
GTGGCGTGACNG
 A G T C A C G T A C T G A C T G A C T G A C T G A G C T C G T A C G T A A G T C A C G T A C G T
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTGGGGTAAC----
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C T G A C T G A G C T C G T A C G T A A G T C A C G T A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTGGGGTAAC
WDNCTGGGCA---
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C T G A C T G A G C T C G T A C G T A A G T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CTGGGGTAAC
ATTGCCTGAGGCAAT
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C T G A C T G A G C T C G T A C G T A A G T C
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

PB0133.1_Hic1_2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTGGGGTAAC---
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C T G A C T G A G C T C G T A C G T A A G T C A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTGGGGTAAC
GCTGTGGTTT-
 A C G T A G T C A C G T A C T G A C T G A C T G A C T G A G C T C G T A C G T A A G T C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T