Information for 2-CCTGACCTGATTAGTW (Motif 3)

A G T C G T A C G A C T A C T G G T C A A G T C G T A C C G A T T A C G C T G A A C G T C G A T C G T A C T A G C G A T C G A T
Reverse Opposite:
G C T A C G T A A G T C C G A T C G T A T G C A A G C T A G T C C G T A A C T G C T A G A C G T A G T C C G T A A C T G C T A G
p-value:1e-10
log p-value:-2.377e+01
Information Content per bp:1.644
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif20.83%
Number of Background Sequences with motif47.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets49.5 +/- 26.0bp
Average Position of motif in Background46.6 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0058.1_Hoxb3/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCTGACCTGATTAGTW---
--TGAGCTAATTAGTTGGA
 A G T C G T A C G A C T A C T G G T C A A G T C G T A C C G A T T A C G C T G A A C G T C G A T C G T A C T A G C G A T C G A T A C G T A C G T A C G T
A C G T A C G T C G A T T C A G T G C A T A C G A T G C G A C T G T C A C G T A C G A T A C G T C T G A T A C G A G C T C A G T T C A G C T A G C G T A

PB0022.1_Gata5_1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCTGACCTGATTAGTW---
--TAAACTGATAAGAAGAT
 A G T C G T A C G A C T A C T G G T C A A G T C G T A C C G A T T A C G C T G A A C G T C G A T C G T A C T A G C G A T C G A T A C G T A C G T A C G T
A C G T A C G T G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

PH0094.1_Lhx4/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCTGACCTGATTAGTW--
-CAAAGCTAATTAGNTTN
 A G T C G T A C G A C T A C T G G T C A A G T C G T A C C G A T T A C G C T G A A C G T C G A T C G T A C T A G C G A T C G A T A C G T A C G T
A C G T G A T C T G C A G C T A T G C A T A C G A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A G C T G C A T C A G T G T C A

ZEB1/MA0103.2/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCTGACCTGATTAGTW
CCTCACCTG-------
 A G T C G T A C G A C T A C T G G T C A A G T C G T A C C G A T T A C G C T G A A C G T C G A T C G T A C T A G C G A T C G A T
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0027.1_Emx2/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCTGACCTGATTAGTW---
--ACCACTAATTAGTGGAC
 A G T C G T A C G A C T A C T G G T C A A G T C G T A C C G A T T A C G C T G A A C G T C G A T C G T A C T A G C G A T C G A T A C G T A C G T A C G T
A C G T A C G T G C T A T A G C T G A C T C G A A G T C G A C T G T C A G C T A C A G T A C G T C T G A T C A G A G C T A C T G T A C G G C T A A G T C

PH0092.1_Lhx2/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCTGACCTGATTAGTW--
-NNNNNCTAATTAGTTTA
 A G T C G T A C G A C T A C T G G T C A A G T C G T A C C G A T T A C G C T G A A C G T C G A T C G T A C T A G C G A T C G A T A C G T A C G T
A C G T A T C G C A G T A C G T G T A C T C G A G A T C G A C T G T C A C T G A A G C T A C G T C T G A C T A G A G C T C A G T A C G T G C T A

PH0154.1_Prrx1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCTGACCTGATTAGTW--
-ANNAGTTAATTAGTTAN
 A G T C G T A C G A C T A C T G G T C A A G T C G T A C C G A T T A C G C T G A A C G T C G A T C G T A C T A G C G A T C G A T A C G T A C G T
A C G T T C G A A T C G G A C T G T C A T C A G A G C T G A C T C T G A C T G A A G C T A C G T C T G A C T A G A G C T C A G T T G C A A T G C

PH0031.1_Evx1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCTGACCTGATTAGTW---
--AGAACTAATTAGTGGAC
 A G T C G T A C G A C T A C T G G T C A A G T C G T A C C G A T T A C G C T G A A C G T C G A T C G T A C T A G C G A T C G A T A C G T A C G T A C G T
A C G T A C G T G C T A T C A G G C T A T C G A A T G C G A C T G T C A G T C A A C G T A C G T C T G A T A C G A G C T A T C G T A C G C G T A T A G C

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCTGACCTGATTAGTW
--TAATYNRATTAR--
 A G T C G T A C G A C T A C T G G T C A A G T C G T A C C G A T T A C G C T G A A C G T C G A T C G T A C T A G C G A T C G A T
A C G T A C G T G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G A C G T A C G T

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CCTGACCTGATTAGTW
-----NBWGATAAGR-
 A G T C G T A C G A C T A C T G G T C A A G T C G T A C C G A T T A C G C T G A A C G T C G A T C G T A C T A G C G A T C G A T
A C G T A C G T A C G T A C G T A C G T T A C G A T G C G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T