Information for 7-GCCTTTTATG (Motif 12)

C T A G G T A C A G T C A G C T A C G T A C G T A C G T T C G A A C G T C T A G
Reverse Opposite:
A G T C G T C A A G C T G T C A C G T A G T C A C T G A C T A G A C T G G A T C
p-value:1e-9
log p-value:-2.168e+01
Information Content per bp:1.841
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif78.9
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets39.4 +/- 23.6bp
Average Position of motif in Background46.7 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.75
Offset:1
Orientation:forward strand
Alignment:GCCTTTTATG---
-CCTTTTATAGNC
 C T A G G T A C A G T C A G C T A C G T A C G T A C G T T C G A A C G T C T A G A C G T A C G T A C G T
A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GCCTTTTATG-
TNCCTTTGATGT
 A C G T C T A G G T A C A G T C A G C T A C G T A C G T A C G T T C G A A C G T C T A G A C G T
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

CDX2/MA0465.1/Jaspar

Match Rank:3
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:GCCTTTTATG----
---TTTTATGGCTN
 C T A G G T A C A G T C A G C T A C G T A C G T A C G T T C G A A C G T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GCCTTTTATG---
TNCCTTTGATCTTN
 A C G T C T A G G T A C A G T C A G C T A C G T A C G T A C G T T C G A A C G T C T A G A C G T A C G T A C G T
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:GCCTTTTATG---
---TTTTATTRGN
 C T A G G T A C A G T C A G C T A C G T A C G T A C G T T C G A A C G T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:6
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GCCTTTTATG-
-CCTTTGAWGT
 C T A G G T A C A G T C A G C T A C G T A C G T A C G T T C G A A C G T C T A G A C G T
A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:7
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GCCTTTTATG--
--NTTTTATGAC
 C T A G G T A C A G T C A G C T A C G T A C G T A C G T T C G A A C G T C T A G A C G T A C G T
A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

CDX1/MA0878.1/Jaspar

Match Rank:8
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:GCCTTTTATG--
---TTTTATTGC
 C T A G G T A C A G T C A G C T A C G T A C G T A C G T T C G A A C G T C T A G A C G T A C G T
A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

POL012.1_TATA-Box/Jaspar

Match Rank:9
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GCCTTTTATG-
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T C T A G G T A C A G T C A G C T A C G T A C G T A C G T T C G A A C G T C T A G A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:10
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GCCTTTTATG-
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T C T A G G T A C A G T C A G C T A C G T A C G T A C G T T C G A A C G T C T A G A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C