Information for 19-KTKTARAWSSSMAMYT (Motif 38)

A C G T A C G T A C G T C G A T C G T A C T G A C G T A G C T A A T G C A T G C A T G C G T C A C G T A G T C A A G T C A C G T
Reverse Opposite:
C G T A C T A G A C G T A C G T A C G T T A C G A T C G T A C G C G A T A C G T G A C T A C G T C G T A G T C A C G T A G T C A
p-value:1e-8
log p-value:-1.977e+01
Information Content per bp:1.761
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.2 +/- 27.1bp
Average Position of motif in Background71.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0033.1_Irf3_1/Jaspar

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:KTKTARAWSSSMAMYT-
---GAGAACCGAAACTG
 A C G T A C G T A C G T C G A T C G T A C T G A C G T A G C T A A T G C A T G C A T G C G T C A C G T A G T C A A G T C A C G T A C G T
A C G T A C G T A C G T A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:KTKTARAWSSSMAMYT
-TTTGAAACCG-----
 A C G T A C G T A C G T C G A T C G T A C T G A C G T A G C T A A T G C A T G C A T G C G T C A C G T A G T C A A G T C A C G T
A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:KTKTARAWSSSMAMYT
GTATAAAAGGCGGGG-
 A C G T A C G T A C G T C G A T C G T A C T G A C G T A G C T A A T G C A T G C A T G C G T C A C G T A G T C A A G T C A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G A C G T

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:KTKTARAWSSSMAMYT
ATTTGAATT-------
 A C G T A C G T A C G T C G A T C G T A C T G A C G T A G C T A A T G C A T G C A T G C G T C A C G T A G T C A A G T C A C G T
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:KTKTARAWSSSMAMYT
GTATAAAAGGCGGGG-
 A C G T A C G T A C G T C G A T C G T A C T G A C G T A G C T A A T G C A T G C A T G C G T C A C G T A G T C A A G T C A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:KTKTARAWSSSMAMYT
----GAAAMTGAAACT
 A C G T A C G T A C G T C G A T C G T A C T G A C G T A G C T A A T G C A T G C A T G C G T C A C G T A G T C A A G T C A C G T
A C G T A C G T A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

TATA-Box(TBP)/Promoter/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--KTKTARAWSSSMAMYT
GNCTATAAAAGG------
 A C G T A C G T A C G T A C G T A C G T C G A T C G T A C T G A C G T A G C T A A T G C A T G C A T G C G T C A C G T A G T C A A G T C A C G T
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:KTKTARAWSSSMAMYT--
---CAAAATCGAAACTAA
 A C G T A C G T A C G T C G A T C G T A C T G A C G T A G C T A A T G C A T G C A T G C G T C A C G T A G T C A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:KTKTARAWSSSMAMYT
----AGAAACGAAAGT
 A C G T A C G T A C G T C G A T C G T A C T G A C G T A G C T A A T G C A T G C A T G C G T C A C G T A G T C A A G T C A C G T
A C G T A C G T A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--KTKTARAWSSSMAMYT--
HWWNNTAATTRGCHAATTAN
 A C G T A C G T A C G T A C G T A C G T C G A T C G T A C T G A C G T A G C T A A T G C A T G C A T G C G T C A C G T A G T C A A G T C A C G T A C G T A C G T
G C A T C G A T C G A T C A G T G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A C G A T A G C T C T G A C T A G