Information for 14-CCTGCCTGGC (Motif 29)

T A G C A T G C A C G T C T A G A G T C A G T C C G A T C T A G A C T G T A G C
Reverse Opposite:
A T C G T G A C G A T C G C T A T C A G T C A G G A T C T G C A T A C G A T C G
p-value:1e-9
log p-value:-2.117e+01
Information Content per bp:1.629
Number of Target Sequences with motif104.0
Percentage of Target Sequences with motif13.45%
Number of Background Sequences with motif3482.8
Percentage of Background Sequences with motif7.16%
Average Position of motif in Targets48.1 +/- 23.4bp
Average Position of motif in Background51.1 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CCTGCCTGGC
-CTGTCTGG-
 T A G C A T G C A C G T C T A G A G T C A G T C C G A T C T A G A C T G T A G C
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCTGCCTGGC
VBSYGTCTGG-
 A C G T T A G C A T G C A C G T C T A G A G T C A G T C C G A T C T A G A C T G T A G C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCCTGGC
NNACTTGCCTT--
 A C G T A C G T A C G T T A G C A T G C A C G T C T A G A G T C A G T C C G A T C T A G A C T G T A G C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CCTGCCTGGC----
-CTGTCTGTCACCT
 T A G C A T G C A C G T C T A G A G T C A G T C C G A T C T A G A C T G T A G C A C G T A C G T A C G T A C G T
A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCCTGGC----
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T T A G C A T G C A C G T C T A G A G T C A G T C C G A T C T A G A C T G T A G C A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCTGCCTGGC----
--TGTCTGDCACCT
 T A G C A T G C A C G T C T A G A G T C A G T C C G A T C T A G A C T G T A G C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCTGCCTGGC--
--GGTCTGGCAT
 T A G C A T G C A C G T C T A G A G T C A G T C C G A T C T A G A C T G T A G C A C G T A C G T
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCTGCCTGGC
-TWGTCTGV-
 T A G C A T G C A C G T C T A G A G T C A G T C C G A T C T A G A C T G T A G C
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCCTGGC--
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C G T T A G C A T G C A C G T C T A G A G T C A G T C C G A T C T A G A C T G T A G C A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCCTGGC
TTCCCGCCWG--
 A C G T A C G T T A G C A T G C A C G T C T A G A G T C A G T C C G A T C T A G A C T G T A G C
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T