Information for 12-AGCARTAAAGGTTTCA (Motif 24)

C G T A T C A G G T A C G C T A C T A G C A G T C G T A T C G A G C T A C A T G A C T G A C G T C G A T G A C T T A G C C G T A
Reverse Opposite:
A C G T A C T G C T G A C G T A C G T A A G T C G T A C C G A T A G C T A C G T G C T A G A T C C G A T C A T G A G T C A C G T
p-value:1e-9
log p-value:-2.248e+01
Information Content per bp:1.690
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.55%
Number of Background Sequences with motif55.5
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets54.2 +/- 25.2bp
Average Position of motif in Background45.9 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AGCARTAAAGGTTTCA
----NTAATKGTTT--
 C G T A T C A G G T A C G C T A C T A G C A G T C G T A T C G A G C T A C A T G A C T G A C G T C G A T G A C T T A G C C G T A
A C G T A C G T A C G T A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.62
Offset:8
Orientation:reverse strand
Alignment:AGCARTAAAGGTTTCA--
--------TGGTTTCAGT
 C G T A T C A G G T A C G C T A C T A G C A G T C G T A T C G A G C T A C A T G A C T G A C G T C G A T G A C T T A G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

PB0045.1_Myb_1/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGCARTAAAGGTTTCA--
-NNNNTAACGGTTNNNAN
 C G T A T C A G G T A C G C T A C T A G C A G T C G T A T C G A G C T A C A T G A C T G A C G T C G A T G A C T T A G C C G T A A C G T A C G T
A C G T G C T A C T G A C G T A C G T A G A C T C T G A C G T A A G T C A T C G C A T G G A C T G A C T C A G T G T A C G T A C G C T A C G A T

PB0046.1_Mybl1_1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGCARTAAAGGTTTCA--
-NNANTAACGGTTNNNAN
 C G T A T C A G G T A C G C T A C T A G C A G T C G T A T C G A G C T A C A T G A C T G A C G T C G A T G A C T T A G C C G T A A C G T A C G T
A C G T G C T A C T G A C G T A C G A T G A C T C T G A T C G A A G T C A T C G C A T G G A C T G A C T C G A T G A C T G A T C G C T A C T G A

CDX2/MA0465.1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGCARTAAAGGTTTCA
AAGCCATAAAA------
 A C G T C G T A T C A G G T A C G C T A C T A G C A G T C G T A T C G A G C T A C A T G A C T G A C G T C G A T G A C T T A G C C G T A
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:6
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AGCARTAAAGGTTTCA
-GCAATAAAA------
 C G T A T C A G G T A C G C T A C T A G C A G T C G T A T C G A G C T A C A T G A C T G A C G T C G A T G A C T T A G C C G T A
A C G T T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:7
Score:0.50
Offset:4
Orientation:forward strand
Alignment:AGCARTAAAGGTTTCA-----
----AATAGGGTATCAATATT
 C G T A T C A G G T A C G C T A C T A G C A G T C G T A T C G A G C T A C A T G A C T G A C G T C G A T G A C T T A G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:8
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---AGCARTAAAGGTTTCA
AAAGGTAATAAAATTT---
 A C G T A C G T A C G T C G T A T C A G G T A C G C T A C T A G C A G T C G T A T C G A G C T A C A T G A C T G A C G T C G A T G A C T T A G C C G T A
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T A C G T A C G T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:9
Score:0.50
Offset:4
Orientation:forward strand
Alignment:AGCARTAAAGGTTTCA-----
----AATAGGGTATCATATAT
 C G T A T C A G G T A C G C T A C T A G C A G T C G T A T C G A G C T A C A T G A C T G A C G T C G A T G A C T T A G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:forward strand
Alignment:AGCARTAAAGGTTTCA
NGYCATAAAWCH----
 C G T A T C A G G T A C G C T A C T A G C A G T C G T A T C G A G C T A C A T G A C T G A C G T C G A T G A C T T A G C C G T A
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T A C G T A C G T