Information for 8-TATWGTGTGGTCATAC (Motif 9)

A G C T G T C A A C G T C G T A C T A G A C G T C A T G C G A T A C T G A C T G C A G T A G T C G T C A C G A T C T G A A G T C
Reverse Opposite:
T A C G A G C T C G T A A C G T C T A G G T C A G T A C A G T C C G T A G T A C C G T A A G T C C G A T C G T A C A G T C T G A
p-value:1e-11
log p-value:-2.609e+01
Information Content per bp:1.759
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.4 +/- 24.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TATWGTGTGGTCATAC
CCATTGTATGCAAAT--
 A C G T A G C T G T C A A C G T C G T A C T A G A C G T C A T G C G A T A C T G A C T G C A G T A G T C G T C A C G A T C T G A A G T C
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TATWGTGTGGTCATAC
--NNHTGTGGTTWN--
 A G C T G T C A A C G T C G T A C T A G A C G T C A T G C G A T A C T G A C T G C A G T A G T C G T C A C G A T C T G A A G T C
A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TATWGTGTGGTCATAC
NNNCCATTGTGTNAN-----
 A C G T A C G T A C G T A C G T A G C T G T C A A C G T C G T A C T A G A C G T C A T G C G A T A C T G A C T G C A G T A G T C G T C A C G A T C T G A A G T C
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T A C G T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TATWGTGTGGTCATAC
CNNNTATTGTTCNNNNN---
 A C G T A C G T A C G T A C G T A G C T G T C A A C G T C G T A C T A G A C G T C A T G C G A T A C T G A C T G C A G T A G T C G T C A C G A T C T G A A G T C
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TATWGTGTGGTCATAC-
NTNTATGTGCACATNNN
 A G C T G T C A A C G T C G T A C T A G A C G T C A T G C G A T A C T G A C T G C A G T A G T C G T C A C G A T C T G A A G T C A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PB0167.1_Sox13_2/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TATWGTGTGGTCATAC
GTATTGGGTGGGTAATT
 A C G T A G C T G T C A A C G T C G T A C T A G A C G T C A T G C G A T A C T G A C T G C A G T A G T C G T C A C G A T C T G A A G T C
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TATWGTGTGGTCATAC
CTCATTGTC---------
 A C G T A C G T A G C T G T C A A C G T C G T A C T A G A C G T C A T G C G A T A C T G A C T G C A G T A G T C G T C A C G A T C T G A A G T C
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TATWGTGTGGTCATAC--
-NTNNNGGGGTCANGNNN
 A G C T G T C A A C G T C G T A C T A G A C G T C A T G C G A T A C T G A C T G C A G T A G T C G T C A C G A T C T G A A G T C A C G T A C G T
A C G T T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

JUND(var.2)/MA0492.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TATWGTGTGGTCATAC
AAAGATGATGTCATC-
 A G C T G T C A A C G T C G T A C T A G A C G T C A T G C G A T A C T G A C T G C A G T A G T C G T C A C G A T C T G A A G T C
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TATWGTGTGGTCATAC
-----TRAGGTCA---
 A G C T G T C A A C G T C G T A C T A G A C G T C A T G C G A T A C T G A C T G C A G T A G T C G T C A C G A T C T G A A G T C
A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T