Information for 18-TGTAATTCTGTTAACT (Motif 25)

C G A T A C T G A C G T C G T A C G T A A C G T C G A T A T G C C G A T A C T G A C G T A G C T C T G A C G T A T A G C C G A T
Reverse Opposite:
C G T A A T C G C G A T A G C T C T G A C G T A G T A C C G T A A T C G C G T A C G T A C G A T A C G T C G T A G T A C C G T A
p-value:1e-8
log p-value:-1.906e+01
Information Content per bp:1.770
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.2 +/- 25.0bp
Average Position of motif in Background59.6 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Phox2b/MA0681.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TGTAATTCTGTTAACT
--TAATTAAATTA---
 C G A T A C T G A C G T C G T A C G T A A C G T C G A T A T G C C G A T A C T G A C G T A G C T C T G A C G T A T A G C C G A T
A C G T A C G T G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A A C G T A C G T A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TGTAATTCTGTTAACT
--TAATTAAATTA---
 C G A T A C T G A C G T C G T A C G T A A C G T C G A T A T G C C G A T A C T G A C G T A G C T C T G A C G T A T A G C C G A T
A C G T A C G T G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A A C G T A C G T A C G T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGTAATTCTGTTAACT
--TAATTNVATTAN--
 C G A T A C T G A C G T C G T A C G T A A C G T C G A T A T G C C G A T A C T G A C G T A G C T C T G A C G T A T A G C C G A T
A C G T A C G T G C A T C T G A C G T A A G C T A C G T G T A C T C G A C T G A A C G T G A C T C G T A C A T G A C G T A C G T

PROP1/MA0715.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGTAATTCTGTTAACT
--TAATTAAATTA---
 C G A T A C T G A C G T C G T A C G T A A C G T C G A T A T G C C G A T A C T G A C G T A G C T C T G A C G T A T A G C C G A T
A C G T A C G T G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A A C G T A C G T A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGTAATTCTGTTAACT-
--TAATTCAATGAAGTG
 C G A T A C T G A C G T C G T A C G T A A C G T C G A T A T G C C G A T A C T G A C G T A G C T C T G A C G T A T A G C C G A T A C G T
A C G T A C G T G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGTAATTCTGTTAACT
-NTAATKGTTT-----
 C G A T A C T G A C G T C G T A C G T A A C G T C G A T A T G C C G A T A C T G A C G T A G C T C T G A C G T A T A G C C G A T
A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T A C G T A C G T A C G T A C G T

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGTAATTCTGTTAACT
--TAATYNRATTAR--
 C G A T A C T G A C G T C G T A C G T A A C G T C G A T A T G C C G A T A C T G A C G T A G C T C T G A C G T A T A G C C G A T
A C G T A C G T G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G A C G T A C G T

PH0071.1_Hoxc6/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGTAATTCTGTTAACT
NNTNATTAATTAATTTG---
 A C G T A C G T A C G T A C G T C G A T A C T G A C G T C G T A C G T A A C G T C G A T A T G C C G A T A C T G A C G T A G C T C T G A C G T A T A G C C G A T
G C A T A C G T A G C T G C A T T G C A C A G T G A C T G C T A C G T A C G A T C G A T C T G A G T C A A G C T C G A T G A C T T C A G A C G T A C G T A C G T

DLX6/MA0882.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGTAATTCTGTTAACT
-NTAATTGN-------
 C G A T A C T G A C G T C G T A C G T A A C G T C G A T A T G C C G A T A C T G A C G T A G C T C T G A C G T A T A G C C G A T
A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Dlx3/MA0880.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGTAATTCTGTTAACT
-NTAATTGN-------
 C G A T A C T G A C G T C G T A C G T A A C G T C G A T A T G C C G A T A C T G A C G T A G C T C T G A C G T A T A G C C G A T
A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T