Information for 4-GTTAATCATTDAC (Motif 4)

A C T G A C G T C G A T C G T A C G T A C G A T A G T C G T C A A C G T C G A T C A T G G T C A A G T C
Reverse Opposite:
A C T G A C G T G A T C C G T A G T C A A C G T A C T G C G T A C G A T A C G T G C T A G T C A A G T C
p-value:1e-17
log p-value:-4.128e+01
Information Content per bp:1.805
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif11.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.9 +/- 23.5bp
Average Position of motif in Background66.2 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF1B/MA0153.2/Jaspar

Match Rank:1
Score:0.87
Offset:0
Orientation:forward strand
Alignment:GTTAATCATTDAC
GTTAATGATTAAC
 A C T G A C G T C G A T C G T A C G T A C G A T A G T C G T C A A C G T C G A T C A T G G T C A A G T C
C A T G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C T G A T C G A G A T C

HNF1A/MA0046.2/Jaspar

Match Rank:2
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-GTTAATCATTDAC-
NGTTAATNATTAACN
 A C G T A C T G A C G T C G A T C G T A C G T A C G A T A G T C G T C A A C G T C G A T C A T G G T C A A G T C A C G T
C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.84
Offset:0
Orientation:forward strand
Alignment:GTTAATCATTDAC
GTTAATNATTAA-
 A C T G A C G T C G A T C G T A C G T A C G A T A G T C G T C A A C G T C G A T C A T G G T C A A G T C
C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:4
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-GTTAATCATTDAC
GGTTAAACATTAA-
 A C G T A C T G A C G T C G A T C G T A C G T A C G A T A G T C G T C A A C G T C G A T C A T G G T C A A G T C
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GTTAATCATTDAC
--TAATCAATTA-
 A C T G A C G T C G A T C G T A C G T A C G A T A G T C G T C A A C G T C G A T C A T G G T C A A G T C
A C G T A C G T C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A A C G T

PH0051.1_Hoxa4/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GTTAATCATTDAC-
CNAGTTAATTAATAANN
 A C G T A C G T A C G T A C T G A C G T C G A T C G T A C G T A C G A T A G T C G T C A A C G T C G A T C A T G G T C A A G T C A C G T
T G A C T C G A G T C A T C A G G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G C T C T G A C T G A G A C T G A T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTTAATCATTDAC
NYTAATCCYB---
 A C T G A C G T C G A T C G T A C G T A C G A T A G T C G T C A A C G T C G A T C A T G G T C A A G T C
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T A C G T

PH0035.1_Gsc/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GTTAATCATTDAC
AATCGTTAATCCCTTTA
 A C G T A C G T A C G T A C G T A C T G A C G T C G A T C G T A C G T A C G A T A G T C G T C A A C G T C G A T C A T G G T C A A G T C
G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

OTX2/MA0712.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GTTAATCATTDAC
-TTAATCCT----
 A C T G A C G T C G A T C G T A C G T A C G A T A G T C G T C A A C G T C G A T C A T G G T C A A G T C
A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GTTAATCATTDAC
---AATTATT---
 A C T G A C G T C G A T C G T A C G T A C G A T A G T C G T C A A C G T C G A T C A T G G T C A A G T C
A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T