Information for 14-CATAASCCTA (Motif 37)

G T A C T C G A A G C T C G T A C T G A T A C G G A T C T A G C A C G T G T C A
Reverse Opposite:
C A G T C G T A A T C G C T A G A T G C A G C T G C A T C T G A A G C T A C T G
p-value:1e-7
log p-value:-1.720e+01
Information Content per bp:1.704
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.88%
Number of Background Sequences with motif833.8
Percentage of Background Sequences with motif1.73%
Average Position of motif in Targets43.7 +/- 28.0bp
Average Position of motif in Background49.8 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CATAASCCTA
--TAATCCCN
 G T A C T C G A A G C T C G T A C T G A T A C G G A T C T A G C A C G T G T C A
A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CATAASCCTA
NGYCATAAAWCH-
 A C G T A C G T A C G T G T A C T C G A A G C T C G T A C T G A T A C G G A T C T A G C A C G T G T C A
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CATAASCCTA
GGTCGTAAAATT-
 A C G T A C G T A C G T G T A C T C G A A G C T C G T A C T G A T A C G G A T C T A G C A C G T G T C A
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CATAASCCTA
GGCCATAAATCA-
 A C G T A C G T A C G T G T A C T C G A A G C T C G T A C T G A T A C G G A T C T A G C A C G T G T C A
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CATAASCCTA
-ATTTGCATA
 G T A C T C G A A G C T C G T A C T G A T A C G G A T C T A G C A C G T G T C A
A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A

NFIL3/MA0025.1/Jaspar

Match Rank:6
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------CATAASCCTA
ANGTTACATAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C T C G A A G C T C G T A C T G A T A C G G A T C T A G C A C G T G T C A
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T A C G T A C G T A C G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CATAASCCTA-
TAATTTGCATAA
 A C G T G T A C T C G A A G C T C G T A C T G A T A C G G A T C T A G C A C G T G T C A A C G T
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A

OTX2/MA0712.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CATAASCCTA
-TTAATCCT-
 G T A C T C G A A G C T C G T A C T G A T A C G G A T C T A G C A C G T G T C A
A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CATAASCCTA-
TAATTTGCATAA
 A C G T G T A C T C G A A G C T C G T A C T G A T A C G G A T C T A G C A C G T G T C A A C G T
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

PH0056.1_Hoxa9/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CATAASCCTA--
ACGGCCATAAAATTAAT
 A C G T A C G T A C G T A C G T A C G T G T A C T C G A A G C T C G T A C T G A T A C G G A T C T A G C A C G T G T C A A C G T A C G T
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T