Information for 13-GABAAATAACATTRCM (Motif 15)

C A T G C G T A A C T G G T C A G T C A C G T A G A C T C G T A C G T A A G T C C G T A A C G T C G A T T C A G A G T C G T A C
Reverse Opposite:
C A T G T A C G A G T C C G T A C G T A G A C T A C T G C G A T A C G T C T G A C G A T A C G T A C G T T A G C G C A T G A T C
p-value:1e-11
log p-value:-2.557e+01
Information Content per bp:1.709
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets27.7 +/- 13.6bp
Average Position of motif in Background63.5 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0093.1_Zfp105_1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GABAAATAACATTRCM
AACAAACAACAAGAG-
 C A T G C G T A A C T G G T C A G T C A C G T A G A C T C G T A C G T A A G T C C G T A A C G T C G A T T C A G A G T C G T A C
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GABAAATAACATTRCM
--AAACAAACATTC--
 C A T G C G T A A C T G G T C A G T C A C G T A G A C T C G T A C G T A A G T C C G T A A C G T C G A T T C A G A G T C G T A C
A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GABAAATAACATTRCM
-AACAATAACATTGTT
 C A T G C G T A A C T G G T C A G T C A C G T A G A C T C G T A C G T A A G T C C G T A A C G T C G A T T C A G A G T C G T A C
A C G T T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

PB0119.1_Foxa2_2/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GABAAATAACATTRCM
-AAAAATAACAAACGG
 C A T G C G T A A C T G G T C A G T C A C G T A G A C T C G T A C G T A A G T C C G T A A C G T C G A T T C A G A G T C G T A C
A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GABAAATAACATTRCM
--AAGATATCCTT---
 C A T G C G T A A C T G G T C A G T C A C G T A G A C T C G T A C G T A A G T C C G T A A C G T C G A T T C A G A G T C G T A C
A C G T A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GABAAATAACATTRCM
CAAACAACAACACCT--
 A C G T C A T G C G T A A C T G G T C A G T C A C G T A G A C T C G T A C G T A A G T C C G T A A C G T C G A T T C A G A G T C G T A C
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GABAAATAACATTRCM
---AATAAACAATN--
 C A T G C G T A A C T G G T C A G T C A C G T A G A C T C G T A C G T A A G T C C G T A A C G T C G A T T C A G A G T C G T A C
A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T A C G T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GABAAATAACATTRCM
--NTAATBNAATTA--
 C A T G C G T A A C T G G T C A G T C A C G T A G A C T C G T A C G T A A G T C C G T A A C G T C G A T T C A G A G T C G T A C
A C G T A C G T G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GABAAATAACATTRCM-
---GCAAAACATTACTA
 C A T G C G T A A C T G G T C A G T C A C G T A G A C T C G T A C G T A A G T C C G T A A C G T C G A T T C A G A G T C G T A C A C G T
A C G T A C G T A C G T A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GABAAATAACATTRCM
------NAACAAT---
 C A T G C G T A A C T G G T C A G T C A C G T A G A C T C G T A C G T A A G T C C G T A A C G T C G A T T C A G A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T