Information for 8-TARKTCTCTTGMM (Motif 13)

A C G T C G T A C T A G A C G T A C G T A G T C A C G T A G T C C G A T A C G T A C T G G T C A G T C A
Reverse Opposite:
A C G T A C G T A G T C C G T A C G T A A C T G C G T A A C T G C G T A G T C A A G T C C G A T C G T A
p-value:1e-11
log p-value:-2.738e+01
Information Content per bp:1.869
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets74.3 +/- 14.3bp
Average Position of motif in Background29.1 +/- 11.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TARKTCTCTTGMM
CTAATCCTCTT---
 A C G T A C G T C G T A C T A G A C G T A C G T A G T C A C G T A G T C C G A T A C G T A C T G G T C A G T C A
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T A C G T A C G T A C G T

Stat6/MA0520.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TARKTCTCTTGMM---
-ANTTCTCAGGAANNN
 A C G T C G T A C T A G A C G T A C G T A G T C A C G T A G T C C G A T A C G T A C T G G T C A G T C A A C G T A C G T A C G T
A C G T C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

PH0171.1_Nkx2-1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TARKTCTCTTGMM---
TAAGCCACTTGAAATT
 A C G T C G T A C T A G A C G T A C G T A G T C A C G T A G T C C G A T A C G T A C T G G T C A G T C A A C G T A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

PH0113.1_Nkx2-4/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TARKTCTCTTGMM---
TAAGCCACTTGAAATT
 A C G T C G T A C T A G A C G T A C G T A G T C A C G T A G T C C G A T A C G T A C T G G T C A G T C A A C G T A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

USF2/MA0526.1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TARKTCTCTTGMM
--GGTCACATGAC
 A C G T C G T A C T A G A C G T A C G T A G T C A C G T A G T C C G A T A C G T A C T G G T C A G T C A
A C G T A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C

PB0147.1_Max_2/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TARKTCTCTTGMM--
-NNGTCGCGTGNCAC
 A C G T C G T A C T A G A C G T A C G T A G T C A C G T A G T C C G A T A C G T A C T G G T C A G T C A A C G T A C G T
A C G T G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

USF1/MA0093.2/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TARKTCTCTTGMM
--GGTCACGTGGC
 A C G T C G T A C T A G A C G T A C G T A G T C A C G T A G T C C G A T A C G T A C T G G T C A G T C A
A C G T A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C

PH0114.1_Nkx2-5/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TARKTCTCTTGMM---
TAAGCCACTTGAATTT
 A C G T C G T A C T A G A C G T A C G T A G T C A C G T A G T C C G A T A C G T A C T G G T C A G T C A A C G T A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TARKTCTCTTGMM
-ANTTCTNNAGAA
 A C G T C G T A C T A G A C G T A C G T A G T C A C G T A G T C C G A T A C G T A C T G G T C A G T C A
A C G T C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A

BHLHE41/MA0636.1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TARKTCTCTTGMM
---GTCACGTGAC
 A C G T C G T A C T A G A C G T A C G T A G T C A C G T A G T C C G A T A C G T A C T G G T C A G T C A
A C G T A C G T A C G T T C A G C A G T A G T C C G T A A G T C C T A G A G C T A T C G G T C A A G T C