Information for 9-AATTAAACCMCCTGCC (Motif 10)

C G T A C G T A A C G T C G A T C T G A G T C A C G T A A G T C A G T C G T C A T A G C G A T C A C G T A C T G A T G C A T G C
Reverse Opposite:
T A C G A T C G A G T C C G T A C T A G A T C G A C G T T A C G T C A G C G A T A C G T A G C T C G T A T C G A A C G T A C G T
p-value:1e-13
log p-value:-3.057e+01
Information Content per bp:1.718
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.9 +/- 24.6bp
Average Position of motif in Background53.1 +/- 12.5bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.59
Offset:5
Orientation:forward strand
Alignment:AATTAAACCMCCTGCC-
-----SNGCACCTGCHS
 C G T A C G T A A C G T C G A T C T G A G T C A C G T A A G T C A G T C G T C A T A G C G A T C A C G T A C T G A T G C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

PB0149.1_Myb_2/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AATTAAACCMCCTGCC----
----CGACCAACTGCCATGC
 C G T A C G T A A C G T C G A T C T G A G T C A C G T A A G T C A G T C G T C A T A G C G A T C A C G T A C T G A T G C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

Ascl2/MA0816.1/Jaspar

Match Rank:3
Score:0.58
Offset:6
Orientation:forward strand
Alignment:AATTAAACCMCCTGCC
------AGCAGCTGCT
 C G T A C G T A A C G T C G A T C T G A G T C A C G T A A G T C A G T C G T C A T A G C G A T C A C G T A C T G A T G C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:4
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:AATTAAACCMCCTGCC--
------NVCAGCTGBBNN
 C G T A C G T A A C G T C G A T C T G A G T C A C G T A A G T C A G T C G T C A T A G C G A T C A C G T A C T G A T G C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AATTAAACCMCCTGCC
YTAATTRAWWCCAGATGT-
 A C G T A C G T A C G T C G T A C G T A A C G T C G A T C T G A G T C A C G T A A G T C A G T C G T C A T A G C G A T C A C G T A C T G A T G C A T G C
G A C T C G A T C T G A G T C A G A C T C G A T T C G A C G T A G C T A G C T A T G A C G T A C C G T A A C T G T G C A C G A T A C T G A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AATTAAACCMCCTGCC---
----CGACCAACTGCCGTG
 C G T A C G T A A C G T C G A T C T G A G T C A C G T A A G T C A G T C G T C A T A G C G A T C A C G T A C T G A T G C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.56
Offset:6
Orientation:forward strand
Alignment:AATTAAACCMCCTGCC
------NNCACCTGNN
 C G T A C G T A A C G T C G A T C T G A G T C A C G T A A G T C A G T C G T C A T A G C G A T C A C G T A C T G A T G C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.56
Offset:6
Orientation:forward strand
Alignment:AATTAAACCMCCTGCC---
------TGCAGCTGTCCCT
 C G T A C G T A A C G T C G A T C T G A G T C A C G T A A G T C A G T C G T C A T A G C G A T C A C G T A C T G A T G C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

TCF3/MA0522.2/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:forward strand
Alignment:AATTAAACCMCCTGCC
------AACACCTGCT
 C G T A C G T A A C G T C G A T C T G A G T C A C G T A A G T C A G T C G T C A T A G C G A T C A C G T A C T G A T G C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.56
Offset:5
Orientation:forward strand
Alignment:AATTAAACCMCCTGCC
-----NNACAGCTGC-
 C G T A C G T A A C G T C G A T C T G A G T C A C G T A A G T C A G T C G T C A T A G C G A T C A C G T A C T G A T G C A T G C
A C G T A C G T A C G T A C G T A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T