Information for 6-AASARSAGRATSAWSS (Motif 7)

C G T A C T G A A T C G C G T A C T G A A T C G C G T A A C T G C T A G C T G A A C G T A T C G C G T A C G A T A T C G A T G C
Reverse Opposite:
A T C G A T G C C G T A A C G T A T C G C G T A A G C T A G T C A G T C A C G T A T G C A G C T A C G T A T G C A G C T A C G T
p-value:1e-11
log p-value:-2.583e+01
Information Content per bp:1.808
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.0 +/- 17.4bp
Average Position of motif in Background53.9 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0126.1_Obox6/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AASARSAGRATSAWSS
-AAAAACGGATTATTG
 C G T A C T G A A T C G C G T A C T G A A T C G C G T A A C T G C T A G C T G A A C G T A T C G C G T A C G A T A T C G A T G C
A C G T G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

Crx/MA0467.1/Jaspar

Match Rank:2
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AASARSAGRATSAWSS
---AAGAGGATTAG--
 C G T A C T G A A T C G C G T A C T G A A T C G C G T A A C T G C T A G C T G A A C G T A T C G C G T A C G A T A T C G A T G C
A C G T A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AASARSAGRATSAWSS--
-TGAACCGGATTAATGAA
 C G T A C T G A A T C G C G T A C T G A A T C G C G T A A C T G C T A G C T G A A C G T A T C G C G T A C G A T A T C G A T G C A C G T A C G T
A C G T G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AASARSAGRATSAWSS--
-TGAACCGGATTAATGAA
 C G T A C T G A A T C G C G T A C T G A A T C G C G T A A C T G C T A G C T G A A C G T A T C G C G T A C G A T A T C G A T G C A C G T A C G T
A C G T G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

RHOXF1/MA0719.1/Jaspar

Match Rank:5
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:AASARSAGRATSAWSS
------NGGATTAN--
 C G T A C T G A A T C G C G T A C T G A A T C G C G T A A C T G C T A G C T G A A C G T A T C G C G T A C G A T A T C G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AASARSAGRATSAWSS
---ANCAGGATGT---
 C G T A C T G A A T C G C G T A C T G A A T C G C G T A A C T G C T A G C T G A A C G T A T C G C G T A C G A T A T C G A T G C
A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:7
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:AASARSAGRATSAWSS
------NGGATTAA--
 C G T A C T G A A T C G C G T A C T G A A T C G C G T A A C T G C T A G C T G A A C G T A T C G C G T A C G A T A T C G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T

PH0121.1_Obox1/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AASARSAGRATSAWSS--
-TTAAGGGGATTAACTAC
 C G T A C T G A A T C G C G T A C T G A A T C G C G T A A C T G C T A G C T G A A C G T A T C G C G T A C G A T A T C G A T G C A C G T A C G T
A C G T C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:AASARSAGRATSAWSS
-----VRGGATTARN-
 C G T A C T G A A T C G C G T A C T G A A T C G C G T A A C T G C T A G C T G A A C G T A T C G C G T A C G A T A T C G A T G C
A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:10
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:AASARSAGRATSAWSS
------GGGATTAA--
 C G T A C T G A A T C G C G T A C T G A A T C G C G T A A C T G C T A G C T G A A C G T A T C G C G T A C G A T A T C G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T