Information for 9-CAAATATATT (Motif 31)

A G T C G T C A G T C A C T G A C G A T G T C A C G A T C G T A A C G T C G A T
Reverse Opposite:
C G T A C G T A A C G T C G T A C A G T C G T A A G C T A C G T C A G T T C A G
p-value:1e-6
log p-value:-1.397e+01
Information Content per bp:1.844
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.23%
Number of Background Sequences with motif227.7
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets55.0 +/- 26.2bp
Average Position of motif in Background49.1 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0080.1_Tbp_1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CAAATATATT----
TCTTTATATATAAATA
 A C G T A C G T A G T C G T C A G T C A C T G A C G A T G T C A C G A T C G T A A C G T C G A T A C G T A C G T A C G T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

PAX3/MA0780.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CAAATATATT-
-TAATCGATTA
 A G T C G T C A G T C A C T G A C G A T G T C A C G A T C G T A A C G T C G A T A C G T
A C G T C G A T T C G A G T C A A G C T A G T C T C A G C T G A A C G T G A C T G C T A

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CAAATATATT--
-AAGGATATNTN
 A G T C G T C A G T C A C T G A C G A T G T C A C G A T C G T A A C G T C G A T A C G T A C G T
A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CAAATATATT-
-TAATCAATTA
 A G T C G T C A G T C A C T G A C G A T G T C A C G A T C G T A A C G T C G A T A C G T
A C G T C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A

PAX7/MA0680.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAAATATATT-
-TAATCGATTA
 A G T C G T C A G T C A C T G A C G A T G T C A C G A T C G T A A C G T C G A T A C G T
A C G T C G A T T G C A G T C A G A C T A G T C T C A G C G T A C G A T G A C T G C T A

PB0064.1_Sox14_1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAAATATATT----
GCTAATTATAATTATC
 A C G T A C G T A G T C G T C A G T C A C T G A C G A T G T C A C G A T C G T A A C G T C G A T A C G T A C G T A C G T A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

PB0079.1_Sry_1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAAATATATT----
TATAATTATAATATTC
 A C G T A C G T A G T C G T C A G T C A C T G A C G A T G T C A C G A T C G T A A C G T C G A T A C G T A C G T A C G T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PB0163.1_Six6_2/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CAAATATATT----
ANNNGGATATATCCNNN
 A C G T A C G T A C G T A G T C G T C A G T C A C T G A C G A T G T C A C G A T C G T A A C G T C G A T A C G T A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

PB0069.1_Sox21_1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CAAATATATT----
NNTAATTATAATNANN
 A C G T A C G T A G T C G T C A G T C A C T G A C G A T G T C A C G A T C G T A A C G T C G A T A C G T A C G T A C G T A C G T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

PROP1/MA0715.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAAATATATT-
TAATTAAATTA
 A G T C G T C A G T C A C T G A C G A T G T C A C G A T C G T A A C G T C G A T A C G T
G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A