Information for 14-SACACAGTGTGTGAAA (Motif 30)

A T G C C G T A A G T C C G T A G T A C C G T A A C T G A C G T A T C G A C G T C T A G A C G T T A C G T G C A C G T A T C G A
Reverse Opposite:
A G C T C G A T A C G T A G T C C G T A A G T C C G T A A T G C C G T A T A G C A C G T A C T G A C G T C T A G A C G T A T C G
p-value:1e-6
log p-value:-1.488e+01
Information Content per bp:1.765
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.7 +/- 20.5bp
Average Position of motif in Background35.9 +/- 12.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:SACACAGTGTGTGAAA
GHTACAWTGTADCHR-
 A T G C C G T A A G T C C G T A G T A C C G T A A C T G A C G T A T C G A C G T C T A G A C G T T A C G T G C A C G T A T C G A
C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:SACACAGTGTGTGAAA
GHWACAWTGTWDCWA-
 A T G C C G T A A G T C C G T A G T A C C G T A A C T G A C G T A T C G A C G T C T A G A C G T T A C G T G C A C G T A T C G A
C T A G G C T A G C A T G C T A G A T C G C T A G C T A C G A T C T A G G C A T C G T A C G A T G A T C G C T A C G T A A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:SACACAGTGTGTGAAA
NNNCCATTGTGTNAN-
 A T G C C G T A A G T C C G T A G T A C C G T A A C T G A C G T A T C G A C G T C T A G A C G T T A C G T G C A C G T A T C G A
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:SACACAGTGTGTGAAA--
---CCATTGTATGCAAAT
 A T G C C G T A A G T C C G T A G T A C C G T A A C T G A C G T A T C G A C G T C T A G A C G T T A C G T G C A C G T A T C G A A C G T A C G T
A C G T A C G T A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

Sox17/MA0078.1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:SACACAGTGTGTGAAA
--CTCATTGTC-----
 A T G C C G T A A G T C C G T A G T A C C G T A A C T G A C G T A T C G A C G T C T A G A C G T T A C G T G C A C G T A T C G A
A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:SACACAGTGTGTGAAA
-GVACAGNMTGTYCTB
 A T G C C G T A A G T C C G T A G T A C C G T A A C T G A C G T A T C G A C G T C T A G A C G T T A C G T G C A C G T A T C G A
A C G T C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:SACACAGTGTGTGAAA
----CTTTGT------
 A T G C C G T A A G T C C G T A G T A C C G T A A C T G A C G T A T C G A C G T C T A G A C G T T A C G T G C A C G T A T C G A
A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:SACACAGTGTGTGAAA---
--GAAAAGGTGTGAAAATT
 A T G C C G T A A G T C C G T A G T A C C G T A A C T G A C G T A T C G A C G T C T A G A C G T T A C G T G C A C G T A T C G A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-SACACAGTGTGTGAAA
VAGRACAKWCTGTYC--
 A C G T A T G C C G T A A G T C C G T A G T A C C G T A A C T G A C G T A T C G A C G T C T A G A C G T T A C G T G C A C G T A T C G A
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C A C G T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-SACACAGTGTGTGAAA
NAGNACANNNTGTNCT-
 A C G T A T G C C G T A A G T C C G T A G T A C C G T A A C T G A C G T A T C G A C G T C T A G A C G T T A C G T G C A C G T A T C G A
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T A C G T