Information for 13-AATSHCTCWTTCT (Motif 25)

C G T A T C G A C A G T A T C G G T A C T A G C A G C T G T A C G C A T C G A T A C G T A G T C A G C T
Reverse Opposite:
C T G A A C T G C G T A C G T A C G T A C A T G C T G A A T C G C A T G A T G C G T C A A G C T C G A T
p-value:1e-7
log p-value:-1.682e+01
Information Content per bp:1.671
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.57%
Number of Background Sequences with motif464.8
Percentage of Background Sequences with motif0.94%
Average Position of motif in Targets55.8 +/- 24.5bp
Average Position of motif in Background49.9 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.56
Offset:7
Orientation:forward strand
Alignment:AATSHCTCWTTCT
-------CTTTGT
 C G T A T C G A C A G T A T C G G T A C T A G C A G C T G T A C G C A T C G A T A C G T A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

SPI1/MA0080.4/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AATSHCTCWTTCT
TACTTCCGCTTTTT
 A C G T C G T A T C G A C A G T A T C G G T A C T A G C A G C T G T A C G C A T C G A T A C G T A G T C A G C T
G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T

JDP2/MA0655.1/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AATSHCTCWTTCT
-ATGACTCAT---
 C G T A T C G A C A G T A T C G G T A C T A G C A G C T G T A C G C A T C G A T A C G T A G T C A G C T
A C G T T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T A C G T A C G T A C G T

BATF::JUN/MA0462.1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AATSHCTCWTTCT
--TGAGTCATTTC
 C G T A T C G A C A G T A T C G G T A C T A G C A G C T G T A C G C A T C G A T A C G T A G T C A G C T
A C G T A C G T C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C

SPIC/MA0687.1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AATSHCTCWTTCT
TACTTCCTCTTTTN
 A C G T C G T A T C G A C A G T A T C G G T A C T A G C A G C T G T A C G C A T C G A T A C G T A G T C A G C T
C A G T C G T A A G T C A C G T C G A T G T A C T A G C A C G T A T G C C G A T C A G T C A G T G A C T C A G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AATSHCTCWTTCT
AGTTTCAGTTTC-
 C G T A T C G A C A G T A T C G G T A C T A G C A G C T G T A C G C A T C G A T A C G T A G T C A G C T
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AATSHCTCWTTCT--
-NNGCACCTTTCTCC
 C G T A T C G A C A G T A T C G G T A C T A G C A G C T G T A C G C A T C G A T A C G T A G T C A G C T A C G T A C G T
A C G T A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

NFE2/MA0841.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AATSHCTCWTTCT
CATGACTCATC--
 C G T A T C G A C A G T A T C G G T A C T A G C A G C T G T A C G C A T C G A T A C G T A G T C A G C T
T G A C T C G A G A C T A C T G G T C A T A G C A G C T G A T C T G C A A G C T A T G C A C G T A C G T

JUN(var.2)/MA0489.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AATSHCTCWTTCT--
-ATGAGTCATNTNNT
 C G T A T C G A C A G T A T C G G T A C T A G C A G C T G T A C G C A T C G A T A C G T A G T C A G C T A C G T A C G T
A C G T T G C A A C G T A C T G C G T A T A C G C G A T A G T C C G T A A G C T G A T C G A C T G A T C G A T C G A C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AATSHCTCWTTCT
ACTTTCACTTTC-
 C G T A T C G A C A G T A T C G G T A C T A G C A G C T G T A C G C A T C G A T A C G T A G T C A G C T
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T