Information for 9-GAACATTTTTAGT (Motif 23)

T A C G C G T A C G T A T G A C C G T A C G A T A C G T A C G T C A G T A C G T C G T A C T A G C G A T
Reverse Opposite:
C G T A A G T C C G A T G T C A G T C A T G C A C G T A C G T A C G A T A C T G A C G T C G A T A T G C
p-value:1e-8
log p-value:-1.889e+01
Information Content per bp:1.713
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif89.7
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets62.2 +/- 24.1bp
Average Position of motif in Background48.1 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0011.1_HMG_class/Jaspar

Match Rank:1
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GAACATTTTTAGT
----ATTGTT---
 T A C G C G T A C G T A T G A C C G T A C G A T A C G T A C G T C A G T A C G T C G T A C T A G C G A T
A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GAACATTTTTAGT
----ATTGTTA--
 T A C G C G T A C G T A T G A C C G T A C G A T A C G T A C G T C A G T A C G T C G T A C T A G C G A T
A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T

Sox11/MA0869.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAACATTTTTAGT---
-AACAATTTCAGTGTT
 T A C G C G T A C G T A T G A C C G T A C G A T A C G T A C G T C A G T A C G T C G T A C T A G C G A T A C G T A C G T A C G T
A C G T C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T

SOX21/MA0866.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAACATTTTTAGT---
-AACAATGGTAGTGTT
 T A C G C G T A C G T A T G A C C G T A C G A T A C G T A C G T C A G T A C G T C G T A C T A G C G A T A C G T A C G T A C G T
A C G T C T G A T C G A A T G C T C G A T C G A C A G T C A T G C A T G G A C T T C G A C A T G C G A T C T A G C A G T A G C T

SOX4/MA0867.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAACATTTTTAGT---
GAACAATTGCAGTGTT
 T A C G C G T A C G T A T G A C C G T A C G A T A C G T A C G T C A G T A C G T C G T A C T A G C G A T A C G T A C G T A C G T
C T A G C G T A C T G A A G T C C T G A C T G A A C G T A C G T C A T G A G T C C T G A A C T G A C G T C T A G A G C T C G A T

SRY/MA0084.1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GAACATTTTTAGT
----ATTGTTTAN
 T A C G C G T A C G T A T G A C C G T A C G A T A C G T A C G T C A G T A C G T C G T A C T A G C G A T
A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GAACATTTTTAGT
TTAAGAACAATAAATT-
 A C G T A C G T A C G T A C G T T A C G C G T A C G T A T G A C C G T A C G A T A C G T A C G T C A G T A C G T C G T A C T A G C G A T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAACATTTTTAGT--
-AAAATTGTTATGAA
 T A C G C G T A C G T A T G A C C G T A C G A T A C G T A C G T C A G T A C G T C G T A C T A G C G A T A C G T A C G T
A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GAACATTTTTAGT
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C G T T A C G C G T A C G T A T G A C C G T A C G A T A C G T A C G T C A G T A C G T C G T A C T A G C G A T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0072.1_Sox5_1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GAACATTTTTAGT
TTTAGAACAATAAAAT-
 A C G T A C G T A C G T A C G T T A C G C G T A C G T A T G A C C G T A C G A T A C G T A C G T C A G T A C G T C G T A C T A G C G A T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T A C G T