Information for 12-TCTGAGAAATTTAGAA (Motif 20)

A C G T G T A C A C G T A C T G C G T A A C T G C G T A C T G A C G T A A C G T A C G T A C G T C G T A A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T G T A C C G A T C G T A C G T A C G T A C G A T A G C T A C G T A G T C A C G T A G T C C G T A A C T G G T C A
p-value:1e-8
log p-value:-2.039e+01
Information Content per bp:1.884
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.2 +/- 29.3bp
Average Position of motif in Background31.5 +/- 1.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCTGAGAAATTTAGAA
TTTCTNAGAAAN------
 A C G T A C G T A C G T G T A C A C G T A C T G C G T A A C T G C G T A C T G A C G T A A C G T A C G T A C G T C G T A A C T G C G T A C G T A
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TCTGAGAAATTTAGAA
CSTGGGAAAD------
 A C G T G T A C A C G T A C T G C G T A A C T G C G T A C T G A C G T A A C G T A C G T A C G T C G T A A C T G C G T A C G T A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TCTGAGAAATTTAGAA
TTCTTGGAAAN------
 A C G T A C G T G T A C A C G T A C T G C G T A A C T G C G T A C T G A C G T A A C G T A C G T A C G T C G T A A C T G C G T A C G T A
A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:4
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TCTGAGAAATTTAGAA
---GAANGTTCTAGAA
 A C G T G T A C A C G T A C T G C G T A A C T G C G T A C T G A C G T A A C G T A C G T A C G T C G T A A C T G C G T A C G T A
A C G T A C G T A C G T T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A

HSF1/MA0486.2/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TCTGAGAAATTTAGAA
---GAACGTTCTAGAA
 A C G T G T A C A C G T A C T G C G T A A C T G C G T A C T G A C G T A A C G T A C G T A C G T C G T A A C T G C G T A C G T A
A C G T A C G T A C G T C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:6
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----TCTGAGAAATTTAGAA
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A C G T A C G T G T A C A C G T A C T G C G T A A C T G C G T A C T G A C G T A A C G T A C G T A C G T C G T A A C T G C G T A C G T A
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

PB0138.1_Irf4_2/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---TCTGAGAAATTTAGAA
GNNACCGAGAATNNN----
 A C G T A C G T A C G T A C G T G T A C A C G T A C T G C G T A A C T G C G T A C T G A C G T A A C G T A C G T A C G T C G T A A C T G C G T A C G T A
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:8
Score:0.50
Offset:9
Orientation:forward strand
Alignment:TCTGAGAAATTTAGAA--
---------ATTTGAATT
 A C G T G T A C A C G T A C T G C G T A A C T G C G T A C T G A C G T A A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

HSF4/MA0771.1/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TCTGAGAAATTTAGAA
---GAANNTTCTAGAA
 A C G T G T A C A C G T A C T G C G T A A C T G C G T A C T G A C G T A A C G T A C G T A C G T C G T A A C T G C G T A C G T A
A C G T A C G T A C G T T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

PB0090.1_Zbtb12_1/Jaspar

Match Rank:10
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:TCTGAGAAATTTAGAA------
-----NNGATCTAGAACCTNNN
 A C G T G T A C A C G T A C T G C G T A A C T G C G T A C T G A C G T A A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G