Information for 6-GGCHCAGAGAACA (Motif 13)

A C T G A T C G A T G C G C T A A G T C C G T A A C T G C G T A C T A G C G T A C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C G T A G T C A C G T A G T C A C G T A C T G C A G T A T C G A T G C A G T C
p-value:1e-9
log p-value:-2.171e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.5 +/- 24.9bp
Average Position of motif in Background61.9 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GGCHCAGAGAACA
-----AGATAASR
 A C T G A T C G A T G C G C T A A G T C C G T A A C T G C G T A C T A G C G T A C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

GATA2/MA0036.2/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GGCHCAGAGAACA----
---NCAGATAAGAANNN
 A C T G A T C G A T G C G C T A A G T C C G T A A C T G C G T A C T A G C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

Foxo1/MA0480.1/Jaspar

Match Rank:3
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GGCHCAGAGAACA---
-----TGTAAACAGGA
 A C T G A T C G A T G C G C T A A G T C C G T A A C T G C G T A C T A G C G T A C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A

GATA3/MA0037.2/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GGCHCAGAGAACA
-----AGATAAGA
 A C T G A T C G A T G C G C T A A G T C C G T A A C T G C G T A C T A G C G T A C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:5
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GGCHCAGAGAACA-
------GTAAACAG
 A C T G A T C G A T G C G C T A A G T C C G T A A C T G C G T A C T A G C G T A C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGCHCAGAGAACA
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T A C T G A T C G A T G C G C T A A G T C C G T A A C T G C G T A C T A G C G T A C G T A A G T C C G T A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGCHCAGAGAACA--
NNNVCTGWGYAAACASN
 A C G T A C G T A C T G A T C G A T G C G C T A A G T C C G T A A C T G C G T A C T A G C G T A C G T A A G T C C G T A A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GGCHCAGAGAACA-
----CCAGGAACAG
 A C T G A T C G A T G C G C T A A G T C C G T A A C T G C G T A C T A G C G T A C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Gata4/MA0482.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGCHCAGAGAACA
--NNGAGATAAGA
 A C T G A T C G A T G C G C T A A G T C C G T A A C T G C G T A C T A G C G T A C G T A A G T C C G T A
A C G T A C G T T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A

FOXP2/MA0593.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGCHCAGAGAACA--
----AAGTAAACAAA
 A C T G A T C G A T G C G C T A A G T C C G T A A C T G C G T A C T A G C G T A C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A