Information for 6-TVADDGHTGTTATAAA (Motif 10)

A C G T T C G A C G T A C G T A C A G T A C T G G C A T A C G T C T A G G C A T A C G T C G T A C A G T G T C A C T G A G T C A
Reverse Opposite:
A C G T A G C T A C G T G T C A C G A T C G T A C G T A G A T C C G T A C G T A G T A C G C T A G C A T A C G T A C G T C G T A
p-value:1e-12
log p-value:-2.886e+01
Information Content per bp:1.732
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets37.1 +/- 25.4bp
Average Position of motif in Background32.8 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TVADDGHTGTTATAAA---
----CCGTATTATAAACAA
 A C G T T C G A C G T A C G T A C A G T A C T G G C A T A C G T C T A G G C A T A C G T C G T A C A G T G T C A C T G A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

PB0123.1_Foxl1_2/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TVADDGHTGTTATAAA--
--NNTTTTGTTTTGATNT
 A C G T T C G A C G T A C G T A C A G T A C T G G C A T A C G T C T A G G C A T A C G T C G T A C A G T G T C A C T G A G T C A A C G T A C G T
A C G T A C G T C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

PB0129.1_Glis2_2/Jaspar

Match Rank:3
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TVADDGHTGTTATAAA---
-----AATATTAATAAAGA
 A C G T T C G A C G T A C G T A C A G T A C T G G C A T A C G T C T A G G C A T A C G T C G T A C A G T G T C A C T G A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

PB0062.1_Sox12_1/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TVADDGHTGTTATAAA-
---TAATTGTTCTAAAC
 A C G T T C G A C G T A C G T A C A G T A C T G G C A T A C G T C T A G G C A T A C G T C G T A C A G T G T C A C T G A G T C A A C G T
A C G T A C G T A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:5
Score:0.52
Offset:8
Orientation:forward strand
Alignment:TVADDGHTGTTATAAA--
--------GTCATAAAAN
 A C G T T C G A C G T A C G T A C A G T A C T G G C A T A C G T C T A G G C A T A C G T C G T A C A G T G T C A C T G A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T

MYF6/MA0667.1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TVADDGHTGTTATAAA
-AACAGCTGTT-----
 A C G T T C G A C G T A C G T A C A G T A C T G G C A T A C G T C T A G G C A T A C G T C G T A C A G T G T C A C T G A G T C A
A C G T T C G A C T G A A T G C C G T A T C A G A G T C A G C T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:7
Score:0.52
Offset:7
Orientation:forward strand
Alignment:TVADDGHTGTTATAAA---
-------NGYCATAAAWCH
 A C G T T C G A C G T A C G T A C A G T A C T G G C A T A C G T C T A G G C A T A C G T C G T A C A G T G T C A C T G A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:TVADDGHTGTTATAAA---
---------TTTGAAACCG
 A C G T T C G A C G T A C G T A C A G T A C T G G C A T A C G T C T A G G C A T A C G T C G T A C A G T G T C A C T G A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

PB0135.1_Hoxa3_2/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TVADDGHTGTTATAAA
CCTTAATNGNTTTT-----
 A C G T A C G T A C G T A C G T T C G A C G T A C G T A C A G T A C T G G C A T A C G T C T A G G C A T A C G T C G T A C A G T G T C A C T G A G T C A
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T A C G T A C G T A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TVADDGHTGTTATAAA--
---GTNTTGTTGTGANNT
 A C G T T C G A C G T A C G T A C A G T A C T G G C A T A C G T C T A G G C A T A C G T C G T A C A G T G T C A C T G A G T C A A C G T A C G T
A C G T A C G T A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T