Information for 9-KGKARRCAATGGC (Motif 15)

A C T G A C T G C A T G C G T A C T A G C T G A A G T C C G T A C G T A A C G T A C T G A C T G G T A C
Reverse Opposite:
A C T G A G T C A G T C C G T A A C G T A C G T A C T G A G C T A G T C A C G T G T A C A G T C T G A C
p-value:1e-10
log p-value:-2.520e+01
Information Content per bp:1.872
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.4 +/- 15.0bp
Average Position of motif in Background50.8 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:1
Score:0.76
Offset:3
Orientation:forward strand
Alignment:KGKARRCAATGGC
---RAACAATGGN
 A C T G A C T G C A T G C G T A C T A G C T G A A G T C C G T A C G T A A C G T A C T G A C T G G T A C
A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:KGKARRCAATGGC
--VRAACAATGG-
 A C T G A C T G C A T G C G T A C T A G C T G A A G T C C G T A C G T A A C G T A C T G A C T G G T A C
A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T

Sox6/MA0515.1/Jaspar

Match Rank:3
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:KGKARRCAATGGC
--AAAACAATGG-
 A C T G A C T G C A T G C G T A C T A G C T G A A G T C C G T A C G T A A C G T A C T G A C T G G T A C
A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.74
Offset:0
Orientation:forward strand
Alignment:KGKARRCAATGGC--
CTCACACAATGGCGC
 A C T G A C T G C A T G C G T A C T A G C T G A A G T C C G T A C G T A A C G T A C T G A C T G G T A C A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

SOX9/MA0077.1/Jaspar

Match Rank:5
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:KGKARRCAATGGC
---GAACAATGG-
 A C T G A C T G C A T G C G T A C T A G C T G A A G T C C G T A C G T A A C G T A C T G A C T G G T A C
A C G T A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:KGKARRCAATGGC
----AACAAAGG-
 A C T G A C T G C A T G C G T A C T A G C T G A A G T C C G T A C G T A A C G T A C T G A C T G G T A C
A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:KGKARRCAATGGC
---GAACAATGGN
 A C T G A C T G C A T G C G T A C T A G C T G A A G T C C G T A C G T A A C G T A C T G A C T G G T A C
A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:KGKARRCAATGGC
----RACAAWGG-
 A C T G A C T G C A T G C G T A C T A G C T G A A G T C C G T A C G T A A C G T A C T G A C T G G T A C
A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:KGKARRCAATGGC----
NNTNNACAATGGGANNN
 A C T G A C T G C A T G C G T A C T A G C T G A A G T C C G T A C G T A A C G T A C T G A C T G G T A C A C G T A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:KGKARRCAATGGC
--VRRACAAWGG-
 A C T G A C T G C A T G C G T A C T A G C T G A A G T C C G T A C G T A A C G T A C T G A C T G G T A C
A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T