Information for 2-CGCAACCTGCGCA (Motif 3)

T A G C A C T G A T G C G T C A C T G A A T G C A G T C G C A T T A C G A G T C A C T G T A G C T G C A
Reverse Opposite:
A C G T A T C G T G A C C T A G A T G C C G T A T C A G T A C G G A C T C A G T T A C G T G A C A C T G
p-value:1e-16
log p-value:-3.883e+01
Information Content per bp:1.641
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.93%
Number of Background Sequences with motif125.7
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets54.6 +/- 22.8bp
Average Position of motif in Background51.4 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CGCAACCTGCGCA
--GCGCCTGCGCA
 T A G C A C T G A T G C G T C A C T G A A T G C A G T C G C A T T A C G A G T C A C T G T A G C T G C A
A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CGCAACCTGCGCA
---WDNCTGGGCA
 T A G C A C T G A T G C G T C A C T G A A T G C A G T C G C A T T A C G A G T C A C T G T A G C T G C A
A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CGCAACCTGCGCA-----
------CTGCGCATGCGC
 T A G C A C T G A T G C G T C A C T G A A T G C A G T C G C A T T A C G A G T C A C T G T A G C T G C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CGCAACCTGCGCA-
TCNCCTGCTGNGNNN
 A C G T T A G C A C T G A T G C G T C A C T G A A T G C A G T C G C A T T A C G A G T C A C T G T A G C T G C A A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

CENPB/MA0637.1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CGCAACCTGCGCA
CCCGCATACAACGAA
 A C G T A C G T T A G C A C T G A T G C G T C A C T G A A T G C A G T C G C A T T A C G A G T C A C T G T A G C T G C A
G A T C G A T C G A T C A C T G A G T C C G T A G A C T T G C A T A G C G C T A T C G A G T A C T C A G G C T A G T C A

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CGCAACCTGCGCA-
NNTCCTGCTGTGNNN
 A C G T T A G C A C T G A T G C G T C A C T G A A T G C A G T C G C A T T A C G A G T C A C T G T A G C T G C A A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CGCAACCTGCGCA
SNGCACCTGCHS-
 T A G C A C T G A T G C G T C A C T G A A T G C A G T C G C A T T A C G A G T C A C T G T A G C T G C A
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

HINFP/MA0131.2/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CGCAACCTGCGCA-
--CAACGTCCGCGG
 T A G C A C T G A T G C G T C A C T G A A T G C A G T C G C A T T A C G A G T C A C T G T A G C T G C A A C G T
A C G T A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

PB0199.1_Zfp161_2/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CGCAACCTGCGCA------
-----GCCGCGCAGTGCGT
 T A G C A C T G A T G C G T C A C T G A A T G C A G T C G C A T T A C G A G T C A C T G T A G C T G C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

EGR1/MA0162.2/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CGCAACCTGCGCA
CCCCCGCCCCCGCC
 A C G T T A G C A C T G A T G C G T C A C T G A A T G C A G T C G C A T T A C G A G T C A C T G T A G C T G C A
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C