Information for 13-GCCTGGCTTCCCT (Motif 22)

A C T G A G T C G T A C A C G T A C T G A T C G A T G C A C G T A G C T A G T C A T G C A G T C A C G T
Reverse Opposite:
G T C A C T A G A T C G T C A G C T G A G T C A A T C G A T G C A G T C C G T A A C T G A C T G A G T C
p-value:1e-7
log p-value:-1.798e+01
Information Content per bp:1.807
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif35.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets50.1 +/- 19.0bp
Average Position of motif in Background52.6 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGGCTTCCCT-
TGCCTGCGYCMCCTT
 A C G T A C T G A G T C G T A C A C G T A C T G A T C G A T G C A C G T A G C T A G T C A T G C A G T C A C G T A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCCTGGCTTCCCT--
GYCTGGYYTNTGTCA
 A C T G A G T C G T A C A C G T A C T G A T C G A T G C A C G T A G C T A G T C A T G C A G T C A C G T A C G T A C G T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCCTGGCTTCCCT
GGTCTGGCAT----
 A C G T A C T G A G T C G T A C A C G T A C T G A T C G A T G C A C G T A G C T A G T C A T G C A G T C A C G T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCCTGGCTTCCCT
AGGCCTAG-------
 A C G T A C G T A C T G A G T C G T A C A C G T A C T G A T C G A T G C A C G T A G C T A G T C A T G C A G T C A C G T
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCCTGGCTTCCCT
AGGCCTNG-------
 A C G T A C G T A C T G A G T C G T A C A C G T A C T G A T C G A T G C A C G T A G C T A G T C A T G C A G T C A C G T
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:6
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GCCTGGCTTCCCT
GTCATGCHTGRCTGS---
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T A C A C G T A C T G A T C G A T G C A C G T A G C T A G T C A T G C A G T C A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCCTGGCTTCCCT
-NTTGGCANN---
 A C T G A G T C G T A C A C G T A C T G A T C G A T G C A C G T A G C T A G T C A T G C A G T C A C G T
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCCTGGCTTCCCT
TGCGTG--------
 A C G T A C T G A G T C G T A C A C G T A C T G A T C G A T G C A C G T A G C T A G T C A T G C A G T C A C G T
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCCTGGCTTCCCT
--TTGGCA-----
 A C T G A G T C G T A C A C G T A C T G A T C G A T G C A C G T A G C T A G T C A T G C A G T C A C G T
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCCTGGCTTCCCT
CTGTCTGG-------
 A C G T A C G T A C T G A G T C G T A C A C G T A C T G A T C G A T G C A C G T A G C T A G T C A T G C A G T C A C G T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T