p-value: | 1e-9 |
log p-value: | -2.154e+01 |
Information Content per bp: | 1.839 |
Number of Target Sequences with motif | 17.0 |
Percentage of Target Sequences with motif | 2.08% |
Number of Background Sequences with motif | 135.3 |
Percentage of Background Sequences with motif | 0.28% |
Average Position of motif in Targets | 37.7 +/- 29.4bp |
Average Position of motif in Background | 50.0 +/- 28.0bp |
Strand Bias (log2 ratio + to - strand density) | 1.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
CDX2/MA0465.1/Jaspar
Match Rank: | 1 |
Score: | 0.92 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGCCATAAAA AAGCCATAAAA |
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PH0064.1_Hoxb9/Jaspar
Match Rank: | 2 |
Score: | 0.92 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGCCATAAAA---- AGAGCCATAAAATTCG |
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Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
Match Rank: | 3 |
Score: | 0.88 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AGCCATAAAA- -GTCATAAAAN |
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CDX1/MA0878.1/Jaspar
Match Rank: | 4 |
Score: | 0.86 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AGCCATAAAA -GCAATAAAA |
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PH0056.1_Hoxa9/Jaspar
Match Rank: | 5 |
Score: | 0.86 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGCCATAAAA----- ACGGCCATAAAATTAAT |
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HOXA10/MA0899.1/Jaspar
Match Rank: | 6 |
Score: | 0.84 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGCCATAAAA- GGTAATAAAAA |
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CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
Match Rank: | 7 |
Score: | 0.83 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGCCATAAAA-- NGYCATAAAWCH |
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Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer
Match Rank: | 8 |
Score: | 0.82 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGCCATAAAA NGCAATTAAA |
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PH0013.1_Cdx2/Jaspar
Match Rank: | 9 |
Score: | 0.82 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGCCATAAAA--- AAAGGTAATAAAATTT |
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HOXD13/MA0909.1/Jaspar
Match Rank: | 10 |
Score: | 0.82 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AGCCATAAAA- -CCAATAAAAA |
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