Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 747)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 48558)	% of Background Sequences with Motif
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e-39	-9.069e+01	0.0000	137.0	18.34%	2384.2	4.91%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e-37	-8.671e+01	0.0000	149.0	19.95%	2894.6	5.96%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e-27	-6.433e+01	0.0000	144.0	19.28%	3368.3	6.94%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-21	-5.005e+01	0.0000	26.0	3.48%	108.8	0.22%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e-21	-4.840e+01	0.0000	138.0	18.47%	3722.3	7.67%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-20	-4.801e+01	0.0000	76.0	10.17%	1356.1	2.79%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-20	-4.690e+01	0.0000	52.0	6.96%	661.4	1.36%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-20	-4.631e+01	0.0000	82.0	10.98%	1602.9	3.30%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-19	-4.601e+01	0.0000	82.0	10.98%	1610.3	3.32%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e-19	-4.589e+01	0.0000	73.0	9.77%	1308.1	2.69%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-18	-4.330e+01	0.0000	42.0	5.62%	460.8	0.95%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-18	-4.261e+01	0.0000	63.0	8.43%	1061.2	2.19%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-18	-4.255e+01	0.0000	84.0	11.24%	1780.3	3.67%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e-18	-4.146e+01	0.0000	90.0	12.05%	2038.9	4.20%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-15	-3.472e+01	0.0000	23.0	3.08%	152.0	0.31%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e-13	-3.211e+01	0.0000	81.0	10.84%	2019.1	4.16%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-8	-1.990e+01	0.0000	25.0	3.35%	376.3	0.78%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e-8	-1.931e+01	0.0000	54.0	7.23%	1443.8	2.97%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e-8	-1.910e+01	0.0000	54.0	7.23%	1452.7	2.99%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-8	-1.865e+01	0.0000	65.0	8.70%	1944.4	4.00%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e-8	-1.856e+01	0.0000	54.0	7.23%	1476.9	3.04%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e-7	-1.829e+01	0.0000	106.0	14.19%	3904.1	8.04%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e-7	-1.789e+01	0.0000	31.0	4.15%	614.7	1.27%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-7	-1.734e+01	0.0000	75.0	10.04%	2472.5	5.09%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e-7	-1.614e+01	0.0000	80.0	10.71%	2787.5	5.74%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e-7	-1.612e+01	0.0000	56.0	7.50%	1680.1	3.46%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e-6	-1.466e+01	0.0000	55.0	7.36%	1715.9	3.53%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-6	-1.424e+01	0.0000	49.0	6.56%	1471.8	3.03%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e-6	-1.413e+01	0.0000	101.0	13.52%	3995.4	8.23%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e-6	-1.398e+01	0.0000	36.0	4.82%	934.5	1.92%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e-5	-1.361e+01	0.0000	72.0	9.64%	2580.4	5.31%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-5	-1.336e+01	0.0000	29.0	3.88%	683.5	1.41%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e-5	-1.331e+01	0.0000	83.0	11.11%	3148.7	6.48%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-5	-1.278e+01	0.0000	74.0	9.91%	2741.1	5.65%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e-5	-1.267e+01	0.0000	82.0	10.98%	3151.2	6.49%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e-5	-1.247e+01	0.0000	107.0	14.32%	4468.2	9.20%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e-5	-1.247e+01	0.0000	68.0	9.10%	2470.6	5.09%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e-5	-1.222e+01	0.0000	14.0	1.87%	203.1	0.42%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-5	-1.204e+01	0.0001	47.0	6.29%	1504.5	3.10%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-5	-1.168e+01	0.0001	30.0	4.02%	787.7	1.62%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e-4	-1.107e+01	0.0001	36.0	4.82%	1068.8	2.20%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e-4	-1.100e+01	0.0001	46.0	6.16%	1522.6	3.14%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e-4	-1.092e+01	0.0002	30.0	4.02%	820.1	1.69%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e-4	-1.069e+01	0.0002	23.0	3.08%	549.5	1.13%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e-4	-1.063e+01	0.0002	64.0	8.57%	2417.8	4.98%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-4	-1.040e+01	0.0002	54.0	7.23%	1942.4	4.00%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e-4	-1.025e+01	0.0003	17.0	2.28%	343.7	0.71%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e-4	-9.918e+00	0.0004	31.0	4.15%	910.1	1.87%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-4	-9.856e+00	0.0004	19.0	2.54%	427.8	0.88%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-4	-9.704e+00	0.0004	77.0	10.31%	3166.4	6.52%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e-4	-9.669e+00	0.0005	52.0	6.96%	1900.3	3.91%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e-4	-9.609e+00	0.0005	9.0	1.20%	110.3	0.23%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e-4	-9.607e+00	0.0005	253.0	33.87%	13325.0	27.44%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e-4	-9.249e+00	0.0006	17.0	2.28%	373.1	0.77%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e-4	-9.244e+00	0.0006	11.0	1.47%	172.1	0.35%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e-3	-8.378e+00	0.0015	44.0	5.89%	1608.9	3.31%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e-3	-8.326e+00	0.0015	78.0	10.44%	3365.3	6.93%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e-3	-8.150e+00	0.0018	66.0	8.84%	2747.1	5.66%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-3	-8.117e+00	0.0018	51.0	6.83%	1977.8	4.07%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e-3	-8.113e+00	0.0018	20.0	2.68%	531.6	1.09%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e-3	-7.876e+00	0.0023	59.0	7.90%	2409.5	4.96%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e-3	-7.664e+00	0.0028	43.0	5.76%	1615.7	3.33%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e-3	-7.362e+00	0.0037	102.0	13.65%	4810.7	9.91%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e-3	-7.177e+00	0.0043	35.0	4.69%	1261.3	2.60%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e-3	-7.135e+00	0.0045	6.0	0.80%	69.8	0.14%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e-3	-7.111e+00	0.0045	5.0	0.67%	46.6	0.10%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-3	-7.082e+00	0.0046	25.0	3.35%	799.0	1.65%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e-3	-7.004e+00	0.0049	149.0	19.95%	7580.4	15.61%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e-2	-6.908e+00	0.0053	12.0	1.61%	264.8	0.55%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e-2	-6.816e+00	0.0057	46.0	6.16%	1840.0	3.79%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e-2	-6.781e+00	0.0058	196.0	26.24%	10432.7	21.49%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e-2	-6.688e+00	0.0063	32.0	4.28%	1152.2	2.37%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e-2	-6.317e+00	0.0090	67.0	8.97%	3009.0	6.20%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e-2	-6.086e+00	0.0112	25.0	3.35%	860.3	1.77%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e-2	-6.085e+00	0.0112	60.0	8.03%	2657.7	5.47%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e-2	-5.885e+00	0.0133	61.0	8.17%	2736.2	5.64%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e-2	-5.867e+00	0.0134	43.0	5.76%	1777.5	3.66%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-2	-5.803e+00	0.0141	28.0	3.75%	1024.3	2.11%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e-2	-5.741e+00	0.0148	62.0	8.30%	2809.6	5.79%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e-2	-5.683e+00	0.0155	89.0	11.91%	4329.1	8.92%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e-2	-5.652e+00	0.0158	115.0	15.39%	5836.5	12.02%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e-2	-5.471e+00	0.0187	19.0	2.54%	620.3	1.28%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e-2	-5.333e+00	0.0212	35.0	4.69%	1415.5	2.92%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e-2	-5.280e+00	0.0221	4.0	0.54%	44.6	0.09%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-2	-5.141e+00	0.0251	24.0	3.21%	879.5	1.81%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e-2	-5.054e+00	0.0270	75.0	10.04%	3633.1	7.48%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e-2	-4.880e+00	0.0318	81.0	10.84%	4004.5	8.25%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e-2	-4.805e+00	0.0339	49.0	6.56%	2218.3	4.57%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e-2	-4.802e+00	0.0339	117.0	15.66%	6121.9	12.61%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e-2	-4.633e+00	0.0393	7.0	0.94%	151.8	0.31%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e-1	-4.499e+00	0.0445	20.0	2.68%	732.7	1.51%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-1	-4.479e+00	0.0449	5.0	0.67%	86.3	0.18%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e-1	-4.343e+00	0.0509	57.0	7.63%	2726.9	5.62%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e-1	-4.292e+00	0.0530	10.0	1.34%	283.4	0.58%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e-1	-4.251e+00	0.0546	46.0	6.16%	2126.4	4.38%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e-1	-4.247e+00	0.0546	19.0	2.54%	702.9	1.45%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-1	-4.133e+00	0.0602	11.0	1.47%	334.6	0.69%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e-1	-4.131e+00	0.0602	76.0	10.17%	3848.8	7.93%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e-1	-4.004e+00	0.0670	56.0	7.50%	2722.1	5.61%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e-1	-3.974e+00	0.0684	10.0	1.34%	298.9	0.62%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e-1	-3.893e+00	0.0734	23.0	3.08%	933.1	1.92%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e-1	-3.816e+00	0.0785	62.0	8.30%	3096.5	6.38%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e-1	-3.795e+00	0.0794	11.0	1.47%	352.8	0.73%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e-1	-3.738e+00	0.0833	10.0	1.34%	310.8	0.64%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e-1	-3.562e+00	0.0984	18.0	2.41%	707.8	1.46%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e-1	-3.542e+00	0.0995	5.0	0.67%	110.5	0.23%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e-1	-3.472e+00	0.1056	4.0	0.54%	76.8	0.16%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e-1	-3.375e+00	0.1153	36.0	4.82%	1692.2	3.48%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e-1	-3.311e+00	0.1218	36.0	4.82%	1701.6	3.50%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e-1	-3.291e+00	0.1232	39.0	5.22%	1872.2	3.86%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e-1	-3.169e+00	0.1379	38.0	5.09%	1834.0	3.78%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e-1	-3.141e+00	0.1405	29.0	3.88%	1336.8	2.75%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-1	-3.090e+00	0.1465	32.0	4.28%	1509.6	3.11%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e-1	-2.929e+00	0.1706	8.0	1.07%	263.1	0.54%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e-1	-2.849e+00	0.1832	83.0	11.11%	4537.1	9.34%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e-1	-2.831e+00	0.1850	12.0	1.61%	464.1	0.96%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e-1	-2.795e+00	0.1901	5.0	0.67%	136.2	0.28%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e-1	-2.695e+00	0.2084	155.0	20.75%	9003.8	18.54%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e-1	-2.690e+00	0.2084	68.0	9.10%	3676.3	7.57%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-1	-2.626e+00	0.2195	4.0	0.54%	101.3	0.21%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e-1	-2.603e+00	0.2227	163.0	21.82%	9535.9	19.64%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e-1	-2.573e+00	0.2278	22.0	2.95%	1023.3	2.11%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e-1	-2.554e+00	0.2301	13.0	1.74%	539.6	1.11%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e-1	-2.537e+00	0.2322	36.0	4.82%	1822.5	3.75%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e-1	-2.529e+00	0.2322	51.0	6.83%	2701.4	5.56%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e-1	-2.424e+00	0.2559	18.0	2.41%	821.7	1.69%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e-1	-2.386e+00	0.2636	106.0	14.19%	6071.4	12.50%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e-1	-2.383e+00	0.2636	31.0	4.15%	1560.2	3.21%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e-1	-2.374e+00	0.2636	6.0	0.80%	201.7	0.42%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e-1	-2.363e+00	0.2636	4.0	0.54%	111.8	0.23%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e-1	-2.331e+00	0.2702	2.0	0.27%	34.4	0.07%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e-1	-2.328e+00	0.2702	5.0	0.67%	157.6	0.32%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e-1	-2.317e+00	0.2702	25.0	3.35%	1228.0	2.53%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e-1	-2.315e+00	0.2702	4.0	0.54%	113.4	0.23%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e-1	-2.304e+00	0.2702	10.0	1.34%	405.2	0.83%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-2.295e+00	0.2702	11.0	1.47%	458.4	0.94%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-2.284e+00	0.2708	11.0	1.47%	459.3	0.95%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-2.174e+00	0.2998	5.0	0.67%	165.2	0.34%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-2.148e+00	0.3057	66.0	8.84%	3693.5	7.61%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-2.102e+00	0.3178	5.0	0.67%	169.7	0.35%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-2.074e+00	0.3245	11.0	1.47%	479.4	0.99%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	-2.046e+00	0.3292	1.0	0.13%	9.4	0.02%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	-2.046e+00	0.3292	1.0	0.13%	10.0	0.02%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-2.026e+00	0.3334	42.0	5.62%	2277.0	4.69%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e0	-2.018e+00	0.3337	27.0	3.61%	1391.7	2.87%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-2.010e+00	0.3342	14.0	1.87%	650.3	1.34%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e0	-1.978e+00	0.3427	33.0	4.42%	1751.5	3.61%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-1.959e+00	0.3467	34.0	4.55%	1814.8	3.74%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-1.905e+00	0.3636	13.0	1.74%	607.2	1.25%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-1.900e+00	0.3636	5.0	0.67%	181.3	0.37%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-1.866e+00	0.3730	12.0	1.61%	556.2	1.15%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e0	-1.863e+00	0.3730	13.0	1.74%	612.8	1.26%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-1.832e+00	0.3809	12.0	1.61%	560.0	1.15%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-1.799e+00	0.3910	103.0	13.79%	6091.2	12.54%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-1.781e+00	0.3958	10.0	1.34%	455.6	0.94%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-1.771e+00	0.3969	3.0	0.40%	92.6	0.19%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-1.759e+00	0.3993	67.0	8.97%	3869.6	7.97%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-1.719e+00	0.4129	5.0	0.67%	193.7	0.40%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-1.713e+00	0.4129	14.0	1.87%	688.9	1.42%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-1.699e+00	0.4160	23.0	3.08%	1214.2	2.50%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-1.640e+00	0.4384	19.0	2.54%	989.7	2.04%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-1.615e+00	0.4467	12.0	1.61%	587.2	1.21%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-1.610e+00	0.4467	64.0	8.57%	3732.2	7.69%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-1.588e+00	0.4534	8.0	1.07%	365.2	0.75%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-1.566e+00	0.4609	26.0	3.48%	1419.9	2.92%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-1.553e+00	0.4640	14.0	1.87%	711.4	1.47%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-1.518e+00	0.4778	44.0	5.89%	2527.0	5.20%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-1.470e+00	0.4981	12.0	1.61%	607.5	1.25%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-1.445e+00	0.5077	5.0	0.67%	214.3	0.44%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-1.424e+00	0.5093	3.0	0.40%	110.0	0.23%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-1.424e+00	0.5093	3.0	0.40%	110.9	0.23%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	-1.424e+00	0.5093	3.0	0.40%	110.3	0.23%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-1.424e+00	0.5093	8.0	1.07%	383.9	0.79%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-1.415e+00	0.5093	8.0	1.07%	384.8	0.79%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-1.374e+00	0.5263	41.0	5.49%	2383.5	4.91%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	-1.372e+00	0.5263	1.0	0.13%	19.6	0.04%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-1.329e+00	0.5446	21.0	2.81%	1168.2	2.41%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	-1.328e+00	0.5446	1.0	0.13%	20.2	0.04%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-1.317e+00	0.5450	18.0	2.41%	989.9	2.04%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-1.282e+00	0.5613	3.0	0.40%	119.2	0.25%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-1.278e+00	0.5613	38.0	5.09%	2226.2	4.58%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e0	-1.272e+00	0.5613	67.0	8.97%	4043.8	8.33%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-1.255e+00	0.5670	15.0	2.01%	820.1	1.69%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-1.240e+00	0.5725	108.0	14.46%	6654.1	13.70%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-1.237e+00	0.5725	48.0	6.43%	2863.5	5.90%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-1.232e+00	0.5725	64.0	8.57%	3871.0	7.97%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-1.223e+00	0.5728	4.0	0.54%	178.2	0.37%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e0	-1.223e+00	0.5728	8.0	1.07%	408.9	0.84%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-1.198e+00	0.5814	38.0	5.09%	2251.1	4.64%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-1.188e+00	0.5842	26.0	3.48%	1508.8	3.11%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-1.176e+00	0.5877	26.0	3.48%	1511.3	3.11%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-1.164e+00	0.5920	8.0	1.07%	416.9	0.86%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-1.164e+00	0.5920	62.0	8.30%	3772.8	7.77%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-1.160e+00	0.5920	91.0	12.18%	5613.9	11.56%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-1.159e+00	0.5920	39.0	5.22%	2326.3	4.79%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-1.148e+00	0.5920	29.0	3.88%	1705.5	3.51%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-1.132e+00	0.5956	21.0	2.81%	1213.4	2.50%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-1.128e+00	0.5956	10.0	1.34%	541.2	1.11%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-1.127e+00	0.5956	15.0	2.01%	845.8	1.74%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-1.116e+00	0.5961	13.0	1.74%	725.1	1.49%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-1.107e+00	0.5985	11.0	1.47%	605.6	1.25%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-1.104e+00	0.5985	3.0	0.40%	133.0	0.27%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-1.101e+00	0.5985	12.0	1.61%	667.9	1.38%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-1.092e+00	0.5988	10.0	1.34%	547.1	1.13%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-1.070e+00	0.6090	2.0	0.27%	79.9	0.16%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-1.060e+00	0.6120	29.0	3.88%	1731.5	3.57%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-1.050e+00	0.6156	1.0	0.13%	28.6	0.06%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-1.038e+00	0.6196	7.0	0.94%	374.1	0.77%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-1.027e+00	0.6234	9.0	1.20%	497.6	1.02%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-1.024e+00	0.6234	22.0	2.95%	1303.1	2.68%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-1.020e+00	0.6234	146.0	19.54%	9215.4	18.98%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-1.015e+00	0.6234	6.0	0.80%	317.3	0.65%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	-1.008e+00	0.6238	2.0	0.27%	83.6	0.17%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-9.980e-01	0.6270	11.0	1.47%	625.6	1.29%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-9.580e-01	0.6496	18.0	2.41%	1070.4	2.20%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-9.517e-01	0.6506	10.0	1.34%	572.0	1.18%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-9.465e-01	0.6510	10.0	1.34%	573.1	1.18%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-9.422e-01	0.6510	21.0	2.81%	1263.7	2.60%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-9.371e-01	0.6511	11.0	1.47%	637.1	1.31%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-9.322e-01	0.6514	7.0	0.94%	390.5	0.80%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-9.311e-01	0.6514	4.0	0.54%	207.9	0.43%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-9.228e-01	0.6516	23.0	3.08%	1395.8	2.87%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	-9.132e-01	0.6550	5.0	0.67%	270.7	0.56%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e0	-9.089e-01	0.6550	2.0	0.27%	90.3	0.19%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-9.051e-01	0.6550	13.0	1.74%	769.7	1.59%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-9.051e-01	0.6550	13.0	1.74%	769.4	1.58%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-9.050e-01	0.6550	81.0	10.84%	5109.2	10.52%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-8.946e-01	0.6550	51.0	6.83%	3190.5	6.57%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-8.694e-01	0.6663	6.0	0.80%	338.3	0.70%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e0	-8.543e-01	0.6735	46.0	6.16%	2888.5	5.95%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-8.458e-01	0.6764	204.0	27.31%	13092.5	26.96%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-8.429e-01	0.6764	3.0	0.40%	156.3	0.32%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-8.261e-01	0.6839	15.0	2.01%	915.3	1.89%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	-8.245e-01	0.6839	4.0	0.54%	221.0	0.46%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e0	-8.206e-01	0.6839	11.0	1.47%	662.1	1.36%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-8.085e-01	0.6871	66.0	8.84%	4198.3	8.65%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-8.064e-01	0.6871	3.0	0.40%	160.8	0.33%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-7.888e-01	0.6921	3.0	0.40%	162.5	0.33%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-7.888e-01	0.6921	3.0	0.40%	162.5	0.33%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	-7.872e-01	0.6921	2.0	0.27%	100.2	0.21%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-7.858e-01	0.6921	16.0	2.14%	990.6	2.04%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-7.850e-01	0.6921	25.0	3.35%	1568.6	3.23%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-7.406e-01	0.7142	44.0	5.89%	2813.2	5.79%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-7.377e-01	0.7142	21.0	2.81%	1327.5	2.73%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-7.335e-01	0.7142	2.0	0.27%	106.0	0.22%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-7.222e-01	0.7187	3.0	0.40%	170.3	0.35%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-7.218e-01	0.7187	23.0	3.08%	1462.4	3.01%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-7.192e-01	0.7187	37.0	4.95%	2370.2	4.88%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-7.015e-01	0.7248	19.0	2.54%	1210.1	2.49%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-6.999e-01	0.7248	131.0	17.54%	8484.4	17.47%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-6.989e-01	0.7248	8.0	1.07%	497.4	1.02%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-6.967e-01	0.7248	14.0	1.87%	887.7	1.83%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-6.937e-01	0.7248	11.0	1.47%	693.1	1.43%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-6.918e-01	0.7248	82.0	10.98%	5307.3	10.93%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-6.863e-01	0.7248	171.0	22.89%	11095.3	22.85%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	-6.495e-01	0.7427	1.0	0.13%	48.2	0.10%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-6.425e-01	0.7450	8.0	1.07%	510.7	1.05%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-6.410e-01	0.7450	20.0	2.68%	1297.9	2.67%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	-6.341e-01	0.7454	12.0	1.61%	775.8	1.60%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-6.178e-01	0.7548	11.0	1.47%	714.3	1.47%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-6.098e-01	0.7579	8.0	1.07%	519.0	1.07%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-5.941e-01	0.7670	8.0	1.07%	522.1	1.08%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-5.799e-01	0.7750	2.0	0.27%	122.2	0.25%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-5.788e-01	0.7750	103.0	13.79%	6764.4	13.93%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-5.712e-01	0.7758	6.0	0.80%	394.9	0.81%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-5.675e-01	0.7758	72.0	9.64%	4745.2	9.77%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-5.616e-01	0.7775	3.0	0.40%	193.2	0.40%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-5.534e-01	0.7809	93.0	12.45%	6132.1	12.63%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-5.362e-01	0.7916	23.0	3.08%	1539.1	3.17%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-5.313e-01	0.7925	4.0	0.54%	267.5	0.55%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-5.271e-01	0.7929	10.0	1.34%	675.0	1.39%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-5.199e-01	0.7957	5.0	0.67%	338.9	0.70%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-5.165e-01	0.7957	4.0	0.54%	270.4	0.56%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-5.137e-01	0.7957	70.0	9.37%	4656.3	9.59%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-4.890e-01	0.8117	34.0	4.55%	2295.4	4.73%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-4.820e-01	0.8117	5.0	0.67%	347.2	0.72%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-4.820e-01	0.8117	5.0	0.67%	347.5	0.72%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	-4.785e-01	0.8117	7.0	0.94%	486.5	1.00%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-4.700e-01	0.8154	5.0	0.67%	350.1	0.72%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-4.611e-01	0.8197	2.0	0.27%	139.1	0.29%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e0	-4.483e-01	0.8273	14.0	1.87%	975.3	2.01%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-4.439e-01	0.8281	21.0	2.81%	1452.0	2.99%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-4.433e-01	0.8281	6.0	0.80%	427.7	0.88%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-4.396e-01	0.8281	54.0	7.23%	3659.4	7.54%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-4.342e-01	0.8281	8.0	1.07%	569.1	1.17%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	-4.314e-01	0.8281	2.0	0.27%	144.6	0.30%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-4.279e-01	0.8281	3.0	0.40%	218.4	0.45%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-4.257e-01	0.8281	2.0	0.27%	145.1	0.30%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-4.157e-01	0.8311	44.0	5.89%	3012.8	6.20%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-4.092e-01	0.8336	15.0	2.01%	1061.5	2.19%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-4.085e-01	0.8336	8.0	1.07%	578.6	1.19%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-4.052e-01	0.8336	35.0	4.69%	2417.9	4.98%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-3.984e-01	0.8341	2.0	0.27%	150.8	0.31%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-3.880e-01	0.8399	7.0	0.94%	515.1	1.06%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-3.854e-01	0.8399	19.0	2.54%	1347.3	2.77%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-3.732e-01	0.8467	15.0	2.01%	1079.2	2.22%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-3.659e-01	0.8500	7.0	0.94%	523.3	1.08%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-3.633e-01	0.8500	2.0	0.27%	157.9	0.33%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-3.613e-01	0.8500	14.0	1.87%	1016.9	2.09%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	-3.539e-01	0.8517	4.0	0.54%	310.5	0.64%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-3.530e-01	0.8517	16.0	2.14%	1159.1	2.39%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-3.523e-01	0.8517	28.0	3.75%	1982.7	4.08%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-3.449e-01	0.8517	6.0	0.80%	459.9	0.95%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-3.402e-01	0.8521	2.0	0.27%	162.2	0.33%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-3.243e-01	0.8629	38.0	5.09%	2684.5	5.53%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-3.062e-01	0.8758	47.0	6.29%	3311.9	6.82%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	-3.037e-01	0.8758	1.0	0.13%	87.4	0.18%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-3.027e-01	0.8758	34.0	4.55%	2431.3	5.01%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-3.004e-01	0.8758	47.0	6.29%	3317.8	6.83%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-2.839e-01	0.8839	27.0	3.61%	1967.9	4.05%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-2.796e-01	0.8849	2.0	0.27%	177.6	0.37%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-2.681e-01	0.8923	1.0	0.13%	94.6	0.19%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-2.648e-01	0.8924	25.0	3.35%	1845.5	3.80%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-2.556e-01	0.8978	7.0	0.94%	571.3	1.18%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-2.550e-01	0.8978	37.0	4.95%	2683.9	5.53%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-2.519e-01	0.8978	13.0	1.74%	1010.3	2.08%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-2.453e-01	0.8984	16.0	2.14%	1229.5	2.53%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-2.452e-01	0.8984	27.0	3.61%	2002.4	4.12%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-2.146e-01	0.9207	18.0	2.41%	1397.3	2.88%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-2.106e-01	0.9215	3.0	0.40%	283.8	0.58%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-1.744e-01	0.9525	4.0	0.54%	383.7	0.79%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-1.732e-01	0.9525	9.0	1.20%	774.2	1.59%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-1.695e-01	0.9525	31.0	4.15%	2369.7	4.88%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-1.528e-01	0.9642	58.0	7.76%	4276.7	8.81%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-1.476e-01	0.9663	51.0	6.83%	3802.9	7.83%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	-1.474e-01	0.9663	1.0	0.13%	129.6	0.27%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-1.441e-01	0.9663	11.0	1.47%	952.9	1.96%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-1.441e-01	0.9663	6.0	0.80%	565.6	1.16%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-1.244e-01	0.9770	25.0	3.35%	2009.9	4.14%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-1.227e-01	0.9770	14.0	1.87%	1203.3	2.48%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-1.097e-01	0.9855	14.0	1.87%	1221.1	2.51%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-1.011e-01	0.9910	1.0	0.13%	152.2	0.31%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-9.472e-02	0.9943	1.0	0.13%	156.1	0.32%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-9.234e-02	0.9943	16.0	2.14%	1400.7	2.88%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-8.335e-02	0.9997	18.0	2.41%	1568.1	3.23%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-8.173e-02	0.9997	5.0	0.67%	545.3	1.12%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-7.933e-02	0.9997	1.0	0.13%	167.8	0.35%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-7.369e-02	1.0000	7.0	0.94%	725.9	1.49%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-7.321e-02	1.0000	1.0	0.13%	172.8	0.36%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-7.303e-02	1.0000	22.0	2.95%	1891.2	3.89%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e0	-6.950e-02	1.0000	21.0	2.81%	1825.7	3.76%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-6.867e-02	1.0000	1.0	0.13%	176.1	0.36%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-6.374e-02	1.0000	9.0	1.20%	907.7	1.87%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-5.583e-02	1.0000	1.0	0.13%	190.0	0.39%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-4.917e-02	1.0000	1.0	0.13%	197.0	0.41%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-3.377e-02	1.0000	23.0	3.08%	2101.3	4.33%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e0	-2.152e-02	1.0000	39.0	5.22%	3390.0	6.98%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-1.915e-02	1.0000	2.0	0.27%	382.0	0.79%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-1.381e-02	1.0000	1.0	0.13%	278.1	0.57%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-8.548e-03	1.0000	52.0	6.96%	4539.0	9.35%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-1.000e-05	1.0000	10.0	1.34%	1893.1	3.90%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	19.2	0.04%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	0.000e+00	1.0000	0.0	0.00%	15.6	0.03%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	0.000e+00	1.0000	0.0	0.00%	53.4	0.11%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	34.0	0.07%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	0.000e+00	1.0000	0.0	0.00%	107.2	0.22%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	0.000e+00	1.0000	0.0	0.00%	21.0	0.04%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	0.000e+00	1.0000	0.0	0.00%	67.8	0.14%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	0.000e+00	1.0000	0.0	0.00%	265.5	0.55%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	0.9	0.00%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	0.000e+00	1.0000	0.0	0.00%	7.3	0.02%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	0.000e+00	1.0000	0.0	0.00%	42.8	0.09%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	0.000e+00	1.0000	0.0	0.00%	31.2	0.06%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	0.000e+00	1.0000	0.0	0.00%	68.0	0.14%