Information for 8-ACAAACAATGTTT (Motif 9)

G C T A G A T C C G T A C G T A G T C A A G T C G C T A C G T A C G A T C T A G G C A T A C G T C G A T
Reverse Opposite:
C G T A C G T A C G T A A G T C C G T A C G A T C G A T A C T G C A G T C G A T A C G T C A T G C A G T
p-value:1e-12
log p-value:-2.835e+01
Information Content per bp:1.757
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif44.2
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets58.9 +/- 22.6bp
Average Position of motif in Background43.8 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxq1/MA0040.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-ACAAACAATGTTT
AATAAACAATN---
 A C G T G C T A G A T C C G T A C G T A G T C A A G T C G C T A C G T A C G A T C T A G G C A T A C G T C G A T
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:2
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:ACAAACAATGTTT
--NAACAAT----
 G C T A G A T C C G T A C G T A G T C A A G T C G C T A C G T A C G A T C T A G G C A T A C G T C G A T
A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ACAAACAATGTTT
-VRAACAATGG--
 G C T A G A T C C G T A C G T A G T C A A G T C G C T A C G T A C G A T C T A G G C A T A C G T C G A T
A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ACAAACAATGTTT
GTAAACAAT----
 G C T A G A T C C G T A C G T A G T C A A G T C G C T A C G T A C G A T C T A G G C A T A C G T C G A T
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ACAAACAATGTTT
--RAACAATGGN-
 G C T A G A T C C G T A C G T A G T C A A G T C G C T A C G T A C G A T C T A G G C A T A C G T C G A T
A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T

SOX9/MA0077.1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ACAAACAATGTTT
--GAACAATGG--
 G C T A G A T C C G T A C G T A G T C A A G T C G C T A C G T A C G A T C T A G G C A T A C G T C G A T
A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T

PH0044.1_Homez/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ACAAACAATGTTT-
NNTAAAAACGATGTTNT
 A C G T A C G T A C G T G C T A G A T C C G T A C G T A G T C A A G T C G C T A C G T A C G A T C T A G G C A T A C G T C G A T A C G T
G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:ACAAACAATGTTT
---AACAAT----
 G C T A G A T C C G T A C G T A G T C A A G T C G C T A C G T A C G A T C T A G G C A T A C G T C G A T
A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ACAAACAATGTTT
-AAAACAATGG--
 G C T A G A T C C G T A C G T A G T C A A G T C G C T A C G T A C G A T C T A G G C A T A C G T C G A T
A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ACAAACAATGTTT-
TTAAGAACAATAAATT
 A C G T A C G T G C T A G A T C C G T A C G T A G T C A A G T C G C T A C G T A C G A T C T A G G C A T A C G T C G A T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T