Information for 6-CTGGCTGGAAGCC (Motif 6)

A T G C C A G T A C T G A T C G A T G C C G A T C T A G A C T G G T C A C T G A C T A G A T G C G A T C
Reverse Opposite:
C T A G T A C G G A T C G A C T A C G T A G T C A G T C C G T A T A C G A T G C G T A C G T C A T A C G
p-value:1e-13
log p-value:-3.089e+01
Information Content per bp:1.684
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.48%
Number of Background Sequences with motif243.4
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets55.4 +/- 24.0bp
Average Position of motif in Background50.9 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CTGGCTGGAAGCC-
CTGGCAGNCTGCCA
 A T G C C A G T A C T G A T C G A T G C C G A T C T A G A C T G G T C A C T G A C T A G A T G C G A T C A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CTGGCTGGAAGCC
CWGGCGGGAA---
 A T G C C A G T A C T G A T C G A T G C C G A T C T A G A C T G G T C A C T G A C T A G A T G C G A T C
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CTGGCTGGAAGCC
-GGGCGGGAAGG-
 A T G C C A G T A C T G A T C G A T G C C G A T C T A G A C T G G T C A C T G A C T A G A T G C G A T C
A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T

E2F6/MA0471.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTGGCTGGAAGCC
-GGGCGGGAAGG-
 A T G C C A G T A C T G A T C G A T G C C G A T C T A G A C T G G T C A C T G A C T A G A T G C G A T C
A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CTGGCTGGAAGCC
--GGCGGGAARN-
 A T G C C A G T A C T G A T C G A T G C C G A T C T A G A C T G G T C A C T G A C T A G A T G C G A T C
A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTGGCTGGAAGCC
BTKGGCGGGAAA--
 A C G T A T G C C A G T A C T G A T C G A T G C C G A T C T A G A C T G G T C A C T G A C T A G A T G C G A T C
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTGGCTGGAAGCC
-TGGCGGGAAAHB
 A T G C C A G T A C T G A T C G A T G C C G A T C T A G A C T G G T C A C T G A C T A G A T G C G A T C
A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTGGCTGGAAGCC
NNCTTCCNGGAAGN-
 A C G T A C G T A T G C C A G T A C T G A T C G A T G C C G A T C T A G A C T G G T C A C T G A C T A G A T G C G A T C
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C A C G T

E2F8/MA0865.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCTGGAAGCC
TTTGGCGGGAAA--
 A C G T A T G C C A G T A C T G A T C G A T G C C G A T C T A G A C T G G T C A C T G A C T A G A T G C G A T C
C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTGGCTGGAAGCC---
TTGGCANNNTGCCAAG
 A T G C C A G T A C T G A T C G A T G C C G A T C T A G A C T G G T C A C T G A C T A G A T G C G A T C A C G T A C G T A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G