Information for 25-CGCCCAGCTGSGC (Motif 43)

G T A C T C A G A T G C A T G C G T A C C G T A A C T G A T G C C G A T C T A G A T C G T A C G A G T C
Reverse Opposite:
T C A G A T G C T A G C A G T C G C T A A T C G A G T C C G A T C A T G A T C G T A C G A G T C A C T G
p-value:1e-5
log p-value:-1.217e+01
Information Content per bp:1.690
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif42.5
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets50.4 +/- 22.8bp
Average Position of motif in Background53.7 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.78
Offset:2
Orientation:forward strand
Alignment:CGCCCAGCTGSGC
--CGCAGCTGCG-
 G T A C T C A G A T G C A T G C G T A C C G T A A C T G A T G C C G A T C T A G A T C G T A C G A G T C
A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CGCCCAGCTGSGC
GGCCYCCTGCTGDGH
 A C G T A C G T G T A C T C A G A T G C A T G C G T A C C G T A A C T G A T G C C G A T C T A G A T C G T A C G A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:CGCCCAGCTGSGC
---GCAGCTGTNN
 G T A C T C A G A T G C A T G C G T A C C G T A A C T G A T G C C G A T C T A G A T C G T A C G A G T C
A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:4
Score:0.75
Offset:0
Orientation:forward strand
Alignment:CGCCCAGCTGSGC
NNVVCAGCTGBN-
 G T A C T C A G A T G C A T G C G T A C C G T A A C T G A T G C C G A T C T A G A T C G T A C G A G T C
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:5
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CGCCCAGCTGSGC
-NAHCAGCTGD--
 G T A C T C A G A T G C A T G C G T A C C G T A A C T G A T G C C G A T C T A G A T C G T A C G A G T C
A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:6
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:CGCCCAGCTGSGC
---CCAGCTGTTN
 G T A C T C A G A T G C A T G C G T A C C G T A A C T G A T G C C G A T C T A G A T C G T A C G A G T C
A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CGCCCAGCTGSGC
-CAGCAGCTGN--
 G T A C T C A G A T G C A T G C G T A C C G T A A C T G A T G C C G A T C T A G A T C G T A C G A G T C
A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:8
Score:0.74
Offset:3
Orientation:forward strand
Alignment:CGCCCAGCTGSGC
---VCAGCTGBNN
 G T A C T C A G A T G C A T G C G T A C C G T A A C T G A T G C C G A T C T A G A T C G T A C G A G T C
A C G T A C G T A C G T T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CGCCCAGCTGSGC
-NNGCAGCTGTC-
 G T A C T C A G A T G C A T G C G T A C C G T A A C T G A T G C C G A T C T A G A T C G T A C G A G T C
A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CGCCCAGCTGSGC
-NAACAGCTGT--
 G T A C T C A G A T G C A T G C G T A C C G T A A C T G A T G C C G A T C T A G A T C G T A C G A G T C
A C G T T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A C G T