Information for 17-TYTAATAGCT (Motif 42)

A C G T A G T C A C G T C G T A C G T A A C G T G T C A C T A G A G T C A C G T
Reverse Opposite:
G T C A A C T G A G T C A C G T C G T A A C G T C G A T G T C A T C A G G T C A
p-value:1e-5
log p-value:-1.226e+01
Information Content per bp:1.789
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.3 +/- 29.6bp
Average Position of motif in Background24.1 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VENTX/MA0724.1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TYTAATAGCT
-CTAATCGNT
 A C G T A G T C A C G T C G T A C G T A A C G T G T C A C T A G A G T C A C G T
A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T

GSX2/MA0893.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TYTAATAGCT
NTTAATTAGN
 A C G T A G T C A C G T C G T A C G T A A C G T G T C A C T A G A G T C A C G T
C A G T A G C T C G A T C G T A C G T A G C A T C A G T C T G A T A C G C A G T

BARX1/MA0875.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TYTAATAGCT
-NTAATTGN-
 A C G T A G T C A C G T C G T A C G T A A C G T G T C A C T A G A G T C A C G T
A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TYTAATAGCT
NNTAATTANN
 A C G T A G T C A C G T C G T A C G T A A C G T G T C A C T A G A G T C A C G T
A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T

Barhl1/MA0877.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TYTAATAGCT
GCTAATTGCT
 A C G T A G T C A C G T C G T A C G T A A C G T G T C A C T A G A G T C A C G T
A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T

PB0187.1_Tcf7_2/Jaspar

Match Rank:6
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----TYTAATAGCT
NNNTTTNTAATACNG
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T G T C A C T A G A G T C A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TYTAATAGCT
TTTAATTGCN
 A C G T A G T C A C G T C G T A C G T A A C G T G T C A C T A G A G T C A C G T
C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C

PH0064.1_Hoxb9/Jaspar

Match Rank:8
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TYTAATAGCT--
NGANTTTTATGGCTCN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T G T C A C T A G A G T C A C G T A C G T A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

Arid3a/MA0151.1/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TYTAATAGCT
TTTAAT----
 A C G T A G T C A C G T C G T A C G T A A C G T G T C A C T A G A G T C A C G T
G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:10
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TYTAATAGCT
TTTTTATTGC-
 A C G T A C G T A G T C A C G T C G T A C G T A A C G T G T C A C T A G A G T C A C G T
C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C A C G T